Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLPTM1O96005 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPTM1O96005 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.42■□□□□ 0.22
CLPTM1O96005 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPTM1O96005 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPTM1O96005 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLPTM1O96005 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLPTM1O96005 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 LINC02228-204ENST00000642115 2962 ntBASIC16.41■□□□□ 0.22
CLPTM1O96005 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.41■□□□□ 0.22
CLPTM1O96005 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.41■□□□□ 0.22
CLPTM1O96005 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CLPTM1O96005 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLPTM1O96005 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.41■□□□□ 0.22
CLPTM1O96005 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLPTM1O96005 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 MFAP1P1-201ENST00000442257 1255 ntBASIC16.41■□□□□ 0.22
CLPTM1O96005 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.41■□□□□ 0.22
CLPTM1O96005 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.41■□□□□ 0.22
CLPTM1O96005 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.41■□□□□ 0.22
CLPTM1O96005 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.41■□□□□ 0.22
CLPTM1O96005 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.41■□□□□ 0.22
CLPTM1O96005 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.41■□□□□ 0.22
CLPTM1O96005 KRT8P11-201ENST00000409686 1436 ntBASIC16.41■□□□□ 0.22
CLPTM1O96005 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLPTM1O96005 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLPTM1O96005 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLPTM1O96005 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CLPTM1O96005 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CLPTM1O96005 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.41■□□□□ 0.22
CLPTM1O96005 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.41■□□□□ 0.22
CLPTM1O96005 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLPTM1O96005 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.41■□□□□ 0.22
CLPTM1O96005 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CLPTM1O96005 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CLPTM1O96005 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CLPTM1O96005 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.4■□□□□ 0.22
CLPTM1O96005 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.4■□□□□ 0.22
CLPTM1O96005 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.4■□□□□ 0.22
CLPTM1O96005 AC211429.1-201ENST00000415277 523 ntBASIC16.4■□□□□ 0.22
CLPTM1O96005 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.4■□□□□ 0.22
CLPTM1O96005 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.4■□□□□ 0.22
CLPTM1O96005 AC133561.5-201ENST00000635547 218 ntBASIC16.4■□□□□ 0.22
CLPTM1O96005 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.4■□□□□ 0.22
CLPTM1O96005 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CLPTM1O96005 CYP2D8P-201ENST00000433633 1490 ntBASIC16.4■□□□□ 0.22
CLPTM1O96005 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.4■□□□□ 0.22
CLPTM1O96005 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
CLPTM1O96005 AC092171.3-201ENST00000610122 2651 ntBASIC16.4■□□□□ 0.22
CLPTM1O96005 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.4■□□□□ 0.22
CLPTM1O96005 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLPTM1O96005 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLPTM1O96005 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLPTM1O96005 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.39■□□□□ 0.22
CLPTM1O96005 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms