Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.89■□□□□ 0.77
MBD3O95983 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3O95983 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.89■□□□□ 0.77
MBD3O95983 AL390955.1-201ENST00000428694 934 ntBASIC19.89■□□□□ 0.77
MBD3O95983 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.89■□□□□ 0.77
MBD3O95983 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.89■□□□□ 0.77
MBD3O95983 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.89■□□□□ 0.77
MBD3O95983 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3O95983 EGLN1P1-201ENST00000531623 762 ntBASIC19.89■□□□□ 0.77
MBD3O95983 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.89■□□□□ 0.77
MBD3O95983 AC079328.2-201ENST00000561241 3354 ntBASIC19.89■□□□□ 0.77
MBD3O95983 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.89■□□□□ 0.77
MBD3O95983 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.89■□□□□ 0.77
MBD3O95983 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3O95983 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.89■□□□□ 0.77
MBD3O95983 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
MBD3O95983 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3O95983 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MBD3O95983 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.88■□□□□ 0.77
MBD3O95983 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD3O95983 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD3O95983 EGFEM1P-202ENST00000431685 1563 ntBASIC19.88■□□□□ 0.77
MBD3O95983 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
MBD3O95983 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.88■□□□□ 0.77
MBD3O95983 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
MBD3O95983 AP000523.1-201ENST00000398242 1049 ntBASIC19.88■□□□□ 0.77
MBD3O95983 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.88■□□□□ 0.77
MBD3O95983 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.88■□□□□ 0.77
MBD3O95983 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.88■□□□□ 0.77
MBD3O95983 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD3O95983 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.88■□□□□ 0.77
MBD3O95983 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD3O95983 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
MBD3O95983 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MBD3O95983 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.88■□□□□ 0.77
MBD3O95983 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
MBD3O95983 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.87■□□□□ 0.77
MBD3O95983 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.87■□□□□ 0.77
MBD3O95983 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.87■□□□□ 0.77
MBD3O95983 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.87■□□□□ 0.77
MBD3O95983 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
MBD3O95983 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
MBD3O95983 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
MBD3O95983 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
MBD3O95983 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.87■□□□□ 0.77
MBD3O95983 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
MBD3O95983 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
MBD3O95983 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.87■□□□□ 0.77
MBD3O95983 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
MBD3O95983 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.86■□□□□ 0.77
MBD3O95983 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3O95983 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
MBD3O95983 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3O95983 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.86■□□□□ 0.77
MBD3O95983 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3O95983 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.86■□□□□ 0.77
MBD3O95983 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.86■□□□□ 0.77
MBD3O95983 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3O95983 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3O95983 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3O95983 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3O95983 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MBD3O95983 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.86■□□□□ 0.77
MBD3O95983 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
MBD3O95983 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.86■□□□□ 0.77
MBD3O95983 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.86■□□□□ 0.77
MBD3O95983 UBE2SP1-201ENST00000450587 669 ntBASIC19.86■□□□□ 0.77
MBD3O95983 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms