Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRUB2O95900 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRUB2O95900 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRUB2O95900 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.16■□□□□ 0.5
TRUB2O95900 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.15■□□□□ 0.5
TRUB2O95900 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRUB2O95900 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRUB2O95900 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRUB2O95900 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.15■□□□□ 0.5
TRUB2O95900 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.15■□□□□ 0.5
TRUB2O95900 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRUB2O95900 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.15■□□□□ 0.5
TRUB2O95900 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.15■□□□□ 0.5
TRUB2O95900 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.15■□□□□ 0.5
TRUB2O95900 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRUB2O95900 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 PRORSD1P-202ENST00000563365 2154 ntBASIC18.15■□□□□ 0.5
TRUB2O95900 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRUB2O95900 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.15■□□□□ 0.5
TRUB2O95900 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.15■□□□□ 0.5
TRUB2O95900 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
TRUB2O95900 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.15■□□□□ 0.5
TRUB2O95900 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.15■□□□□ 0.5
TRUB2O95900 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.15■□□□□ 0.5
TRUB2O95900 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRUB2O95900 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRUB2O95900 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRUB2O95900 AC022211.2-201ENST00000585075 2527 ntBASIC18.14■□□□□ 0.49
TRUB2O95900 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.14■□□□□ 0.49
TRUB2O95900 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRUB2O95900 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.14■□□□□ 0.49
TRUB2O95900 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.14■□□□□ 0.49
TRUB2O95900 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.14■□□□□ 0.49
TRUB2O95900 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.14■□□□□ 0.49
TRUB2O95900 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRUB2O95900 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.14■□□□□ 0.49
TRUB2O95900 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.14■□□□□ 0.49
TRUB2O95900 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.14■□□□□ 0.49
TRUB2O95900 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.14■□□□□ 0.49
TRUB2O95900 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRUB2O95900 RNPS1P1-201ENST00000507437 918 ntBASIC18.14■□□□□ 0.49
TRUB2O95900 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.14■□□□□ 0.49
TRUB2O95900 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.14■□□□□ 0.49
TRUB2O95900 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.14■□□□□ 0.49
TRUB2O95900 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.14■□□□□ 0.49
TRUB2O95900 MTDHP4-201ENST00000600287 670 ntBASIC18.14■□□□□ 0.49
TRUB2O95900 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
TRUB2O95900 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 AC093525.9-201ENST00000624961 1746 ntBASIC18.14■□□□□ 0.49
TRUB2O95900 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRUB2O95900 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRUB2O95900 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRUB2O95900 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.14■□□□□ 0.49
TRUB2O95900 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRUB2O95900 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.13■□□□□ 0.49
TRUB2O95900 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms