Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ABCA1O95477 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.53□□□□□ -0.08
ABCA1O95477 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.53□□□□□ -0.08
ABCA1O95477 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.53□□□□□ -0.08
ABCA1O95477 AL139400.1-201ENST00000366220 510 ntBASIC14.53□□□□□ -0.08
ABCA1O95477 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.53□□□□□ -0.08
ABCA1O95477 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.53□□□□□ -0.08
ABCA1O95477 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.53□□□□□ -0.08
ABCA1O95477 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.53□□□□□ -0.08
ABCA1O95477 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ABCA1O95477 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.53□□□□□ -0.08
ABCA1O95477 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ABCA1O95477 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.53□□□□□ -0.08
ABCA1O95477 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.53□□□□□ -0.08
ABCA1O95477 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.53□□□□□ -0.08
ABCA1O95477 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
ABCA1O95477 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 SIRPAP1-201ENST00000448467 1770 ntBASIC14.53□□□□□ -0.08
ABCA1O95477 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.53□□□□□ -0.08
ABCA1O95477 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.53□□□□□ -0.08
ABCA1O95477 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.53□□□□□ -0.08
ABCA1O95477 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ABCA1O95477 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ABCA1O95477 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ABCA1O95477 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.53□□□□□ -0.08
ABCA1O95477 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.53□□□□□ -0.08
ABCA1O95477 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.53□□□□□ -0.08
ABCA1O95477 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ABCA1O95477 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.53□□□□□ -0.08
ABCA1O95477 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ABCA1O95477 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ABCA1O95477 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ABCA1O95477 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ABCA1O95477 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ABCA1O95477 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ABCA1O95477 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ABCA1O95477 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ABCA1O95477 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ABCA1O95477 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ABCA1O95477 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ABCA1O95477 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ABCA1O95477 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ABCA1O95477 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.52□□□□□ -0.08
ABCA1O95477 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ABCA1O95477 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.52□□□□□ -0.08
ABCA1O95477 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.52□□□□□ -0.08
ABCA1O95477 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
ABCA1O95477 AP000344.2-201ENST00000512987 629 ntBASIC14.52□□□□□ -0.08
ABCA1O95477 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ABCA1O95477 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.52□□□□□ -0.08
ABCA1O95477 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.52□□□□□ -0.08
ABCA1O95477 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
ABCA1O95477 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ABCA1O95477 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ABCA1O95477 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCA1O95477 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ABCA1O95477 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCA1O95477 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCA1O95477 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
ABCA1O95477 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCA1O95477 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.52□□□□□ -0.09
ABCA1O95477 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.52□□□□□ -0.09
ABCA1O95477 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCA1O95477 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ABCA1O95477 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCA1O95477 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.52□□□□□ -0.09
ABCA1O95477 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCA1O95477 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.52□□□□□ -0.09
ABCA1O95477 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCA1O95477 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.52□□□□□ -0.09
ABCA1O95477 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
ABCA1O95477 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCA1O95477 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCA1O95477 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.52□□□□□ -0.09
ABCA1O95477 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.52□□□□□ -0.09
ABCA1O95477 AC103564.2-201ENST00000432853 1299 ntBASIC14.52□□□□□ -0.09
ABCA1O95477 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
ABCA1O95477 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.52□□□□□ -0.09
ABCA1O95477 PDPK2P-202ENST00000562415 1191 ntBASIC14.52□□□□□ -0.09
ABCA1O95477 AL031432.2-201ENST00000566714 459 ntBASIC14.52□□□□□ -0.09
ABCA1O95477 AL928711.1-201ENST00000570165 459 ntBASIC14.52□□□□□ -0.09
ABCA1O95477 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.52□□□□□ -0.09
ABCA1O95477 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.52□□□□□ -0.09
ABCA1O95477 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms