Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC11.9□□□□□ -0.5
NDUFA1O15239 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC11.9□□□□□ -0.5
NDUFA1O15239 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
NDUFA1O15239 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
NDUFA1O15239 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC11.9□□□□□ -0.51
NDUFA1O15239 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
NDUFA1O15239 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC11.9□□□□□ -0.51
NDUFA1O15239 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFA1O15239 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
NDUFA1O15239 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC11.89□□□□□ -0.51
NDUFA1O15239 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
NDUFA1O15239 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC11.89□□□□□ -0.51
NDUFA1O15239 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC11.89□□□□□ -0.51
NDUFA1O15239 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
NDUFA1O15239 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
NDUFA1O15239 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
NDUFA1O15239 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFA1O15239 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFA1O15239 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
NDUFA1O15239 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC11.89□□□□□ -0.51
NDUFA1O15239 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
NDUFA1O15239 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 AC009947.2-201ENST00000444014 672 ntBASIC11.89□□□□□ -0.51
NDUFA1O15239 SNORA78-201ENST00000459373 127 ntBASIC11.89□□□□□ -0.51
NDUFA1O15239 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFA1O15239 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC11.89□□□□□ -0.51
NDUFA1O15239 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFA1O15239 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFA1O15239 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC11.89□□□□□ -0.51
NDUFA1O15239 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFA1O15239 NEK4P2-201ENST00000580004 1012 ntBASIC11.89□□□□□ -0.51
NDUFA1O15239 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 AC024243.1-201ENST00000609234 778 ntBASIC11.89□□□□□ -0.51
NDUFA1O15239 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
NDUFA1O15239 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFA1O15239 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 MST1L-201ENST00000442552 2185 ntBASIC11.89□□□□□ -0.51
NDUFA1O15239 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.89□□□□□ -0.51
NDUFA1O15239 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFA1O15239 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFA1O15239 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC11.89□□□□□ -0.51
NDUFA1O15239 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC11.88□□□□□ -0.51
NDUFA1O15239 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC11.88□□□□□ -0.51
NDUFA1O15239 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
NDUFA1O15239 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
NDUFA1O15239 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 AL356309.3-201ENST00000624132 1934 ntBASIC11.88□□□□□ -0.51
NDUFA1O15239 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC11.88□□□□□ -0.51
NDUFA1O15239 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
NDUFA1O15239 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.88□□□□□ -0.51
NDUFA1O15239 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
NDUFA1O15239 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms