Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.32■□□□□ 0.04
NPIPB4C9JG80 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.32■□□□□ 0.04
NPIPB4C9JG80 AL022326.1-202ENST00000641533 845 ntBASIC15.32■□□□□ 0.04
NPIPB4C9JG80 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NPIPB4C9JG80 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB4C9JG80 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB4C9JG80 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NPIPB4C9JG80 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB4C9JG80 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB4C9JG80 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB4C9JG80 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB4C9JG80 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB4C9JG80 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB4C9JG80 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPIPB4C9JG80 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.32■□□□□ 0.04
NPIPB4C9JG80 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 AC097637.2-201ENST00000624096 1997 ntBASIC15.31■□□□□ 0.04
NPIPB4C9JG80 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 LINC00982-205ENST00000420957 435 ntBASIC15.31■□□□□ 0.04
NPIPB4C9JG80 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 HCG4P8-203ENST00000443049 980 ntBASIC15.31■□□□□ 0.04
NPIPB4C9JG80 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 FOSL1P1-201ENST00000511041 816 ntBASIC15.31■□□□□ 0.04
NPIPB4C9JG80 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 AL353135.1-201ENST00000606729 504 ntBASIC15.31■□□□□ 0.04
NPIPB4C9JG80 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 NCF1C-201ENST00000438382 1427 ntBASIC15.31■□□□□ 0.04
NPIPB4C9JG80 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPIPB4C9JG80 PCDHA12-202ENST00000613593 2588 ntBASIC15.31■□□□□ 0.04
NPIPB4C9JG80 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 AC012313.1-201ENST00000593393 3059 ntBASIC15.3■□□□□ 0.04
NPIPB4C9JG80 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 TSPY19P-201ENST00000418461 509 ntBASIC15.3■□□□□ 0.04
NPIPB4C9JG80 TSPY18P-201ENST00000441642 509 ntBASIC15.3■□□□□ 0.04
NPIPB4C9JG80 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPIPB4C9JG80 NKILA-202ENST00000614771 2598 ntBASIC15.3■□□□□ 0.04
NPIPB4C9JG80 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPB4C9JG80 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms