Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 AC026271.2-201ENST00000428091 497 ntBASIC12.23□□□□□ -0.45
LINC01546A6NGU7 TSPY17P-201ENST00000450329 467 ntBASIC12.23□□□□□ -0.45
LINC01546A6NGU7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 AC144831.1-201ENST00000573312 2656 ntBASIC12.23□□□□□ -0.45
LINC01546A6NGU7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01546A6NGU7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 SLC25A1P2-201ENST00000430693 912 ntBASIC12.22□□□□□ -0.45
LINC01546A6NGU7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 MIR3917-201ENST00000580971 93 ntBASIC12.22□□□□□ -0.45
LINC01546A6NGU7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 GXYLT1P4-201ENST00000613576 1192 ntBASIC12.22□□□□□ -0.45
LINC01546A6NGU7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 LINC02228-204ENST00000642115 2962 ntBASIC12.22□□□□□ -0.45
LINC01546A6NGU7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 HYMAI-201ENST00000635591 3347 ntBASIC12.22□□□□□ -0.45
LINC01546A6NGU7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
LINC01546A6NGU7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01546A6NGU7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms