Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
CCDC144AA2RUR9 AC016396.2-201ENST00000562575 1417 ntBASIC24.69■■□□□ 1.54
CCDC144AA2RUR9 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CCDC144AA2RUR9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CCDC144AA2RUR9 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC24.69■■□□□ 1.54
CCDC144AA2RUR9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CCDC144AA2RUR9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
CCDC144AA2RUR9 RFPL4AP1-201ENST00000530883 850 ntBASIC24.69■■□□□ 1.54
CCDC144AA2RUR9 DUX4L17-201ENST00000557360 1267 ntBASIC24.69■■□□□ 1.54
CCDC144AA2RUR9 AC105339.1-204ENST00000636249 355 ntBASIC24.69■■□□□ 1.54
CCDC144AA2RUR9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC24.69■■□□□ 1.54
CCDC144AA2RUR9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 AC093525.9-201ENST00000624961 1746 ntBASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 AC004461.1-201ENST00000412461 403 ntBASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 NMU-203ENST00000507338 658 ntTSL 3 BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CCDC144AA2RUR9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 AC002056.1-201ENST00000395613 760 ntBASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 MIR4515-201ENST00000584082 81 ntBASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 BSG-214ENST00000614867 960 ntTSL 3 BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC24.67■■□□□ 1.54
CCDC144AA2RUR9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 AL121761.2-201ENST00000598007 1648 ntBASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 TSEN15P1-201ENST00000423257 515 ntBASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCDC144AA2RUR9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 PON3-203ENST00000427422 894 ntTSL 3 BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 CYMP-203ENST00000474680 1263 ntBASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC24.65■■□□□ 1.54
CCDC144AA2RUR9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms