Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 KRT8P47-201ENST00000604727 1398 ntBASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 AC099063.4-201ENST00000641099 1602 ntBASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 KRT18P65-201ENST00000439811 1286 ntBASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 FAM87A-204ENST00000613235 858 ntBASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.28■□□□□ 0.2
SH3PXD2BA1X283 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 AL049597.2-201ENST00000565575 961 ntBASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SH3PXD2BA1X283 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.27■□□□□ 0.19
SH3PXD2BA1X283 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SH3PXD2BA1X283 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.27■□□□□ 0.19
SH3PXD2BA1X283 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SH3PXD2BA1X283 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH3PXD2BA1X283 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SH3PXD2BA1X283 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SH3PXD2BA1X283 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH3PXD2BA1X283 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH3PXD2BA1X283 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SH3PXD2BA1X283 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SH3PXD2BA1X283 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SH3PXD2BA1X283 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SH3PXD2BA1X283 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SH3PXD2BA1X283 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 TSPY26P-202ENST00000565928 3884 ntBASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 HMGA1P5-201ENST00000412453 271 ntBASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.26■□□□□ 0.19
SH3PXD2BA1X283 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms