Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 HLA-F-220ENST00000434407 884 ntBASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 TSPY12P-201ENST00000421279 868 ntBASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 AC117947.1-201ENST00000427448 529 ntBASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 AC092597.1-201ENST00000487352 616 ntBASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.75■□□□□ 0.27
RNF103-CHMP3A0A140T963 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 HLA-J-201ENST00000462773 1622 ntBASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 AC005521.1-201ENST00000393351 872 ntBASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 DDX43P3-201ENST00000441064 443 ntBASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 KRT18P57-201ENST00000443599 1254 ntBASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 AC009154.2-201ENST00000621177 724 ntBASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RNF103-CHMP3A0A140T963 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF103-CHMP3A0A140T963 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms