Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NIPSNAP3AQ9UFN0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.62■□□□□ 0.25
NIPSNAP3AQ9UFN0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NIPSNAP3AQ9UFN0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NIPSNAP3AQ9UFN0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 AC018695.7-201ENST00000624587 2492 ntBASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
NIPSNAP3AQ9UFN0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 AL138966.2-201ENST00000621997 464 ntBASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 PCDHB19P-201ENST00000570871 2371 ntBASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NIPSNAP3AQ9UFN0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 FAM8A6P-201ENST00000407496 1135 ntBASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 MTCL1P1-201ENST00000446207 792 ntBASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.59■□□□□ 0.25
NIPSNAP3AQ9UFN0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms