Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
THSD1Q9NS62 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
THSD1Q9NS62 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THSD1Q9NS62 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
THSD1Q9NS62 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
THSD1Q9NS62 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
THSD1Q9NS62 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THSD1Q9NS62 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
THSD1Q9NS62 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
THSD1Q9NS62 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
THSD1Q9NS62 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.88■□□□□ 0.29
THSD1Q9NS62 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.88■□□□□ 0.29
THSD1Q9NS62 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 MCCD1P2-201ENST00000423228 335 ntBASIC16.88■□□□□ 0.29
THSD1Q9NS62 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.88■□□□□ 0.29
THSD1Q9NS62 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.88■□□□□ 0.29
THSD1Q9NS62 AC136632.2-201ENST00000512891 861 ntBASIC16.88■□□□□ 0.29
THSD1Q9NS62 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.88■□□□□ 0.29
THSD1Q9NS62 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.88■□□□□ 0.29
THSD1Q9NS62 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
THSD1Q9NS62 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.88■□□□□ 0.29
THSD1Q9NS62 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 AC002310.6-201ENST00000624451 1377 ntBASIC16.88■□□□□ 0.29
THSD1Q9NS62 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
THSD1Q9NS62 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.87■□□□□ 0.29
THSD1Q9NS62 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.87■□□□□ 0.29
THSD1Q9NS62 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
THSD1Q9NS62 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.87■□□□□ 0.29
THSD1Q9NS62 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
THSD1Q9NS62 KRT18P27-201ENST00000427733 1299 ntBASIC16.87■□□□□ 0.29
THSD1Q9NS62 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.87■□□□□ 0.29
THSD1Q9NS62 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.87■□□□□ 0.29
THSD1Q9NS62 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.87■□□□□ 0.29
THSD1Q9NS62 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
THSD1Q9NS62 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
THSD1Q9NS62 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.87■□□□□ 0.29
THSD1Q9NS62 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THSD1Q9NS62 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THSD1Q9NS62 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THSD1Q9NS62 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THSD1Q9NS62 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
THSD1Q9NS62 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THSD1Q9NS62 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
THSD1Q9NS62 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
THSD1Q9NS62 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
THSD1Q9NS62 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 MIR3197-201ENST00000582241 73 ntBASIC16.86■□□□□ 0.29
THSD1Q9NS62 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THSD1Q9NS62 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.86■□□□□ 0.29
THSD1Q9NS62 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms