Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 LYSMD4-203ENST00000378904 2122 ntBASIC15.49■□□□□ 0.07
NELFAQ9H3P2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 AL645608.8-201ENST00000606034 2086 ntBASIC15.49■□□□□ 0.07
NELFAQ9H3P2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 IGHV3-52-201ENST00000519770 353 ntBASIC15.49■□□□□ 0.07
NELFAQ9H3P2 KRT126P-201ENST00000549467 1181 ntBASIC15.49■□□□□ 0.07
NELFAQ9H3P2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 IFNL4P1-201ENST00000607083 540 ntBASIC15.49■□□□□ 0.07
NELFAQ9H3P2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 CROCCP2-202ENST00000412962 2773 ntBASIC15.49■□□□□ 0.07
NELFAQ9H3P2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NELFAQ9H3P2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 PRORSD1P-202ENST00000563365 2154 ntBASIC15.48■□□□□ 0.07
NELFAQ9H3P2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 AKR1C7P-201ENST00000305623 895 ntBASIC15.48■□□□□ 0.07
NELFAQ9H3P2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 AL450487.1-201ENST00000426799 995 ntBASIC15.48■□□□□ 0.07
NELFAQ9H3P2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 AC091304.2-201ENST00000564639 760 ntBASIC15.48■□□□□ 0.07
NELFAQ9H3P2 AL591684.3-201ENST00000605187 298 ntBASIC15.48■□□□□ 0.07
NELFAQ9H3P2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 AC019129.2-201ENST00000609837 1235 ntBASIC15.48■□□□□ 0.07
NELFAQ9H3P2 AL139327.4-201ENST00000612362 153 ntBASIC15.48■□□□□ 0.07
NELFAQ9H3P2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 SIRPAP1-201ENST00000448467 1770 ntBASIC15.48■□□□□ 0.07
NELFAQ9H3P2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NELFAQ9H3P2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms