Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 GPRC5C-208ENST00000581590 1554 ntAPPRIS ALT2 TSL 523.05■■□□□ 1.283e-13■■□□□ 13.8
XRN2Q9H0D6 EXD3-211ENST00000490886 1123 ntTSL 522.54■■□□□ 1.26e-6■■□□□ 13.8
XRN2Q9H0D6 VWCE-207ENST00000538579 581 ntTSL 222.49■■□□□ 1.195e-6■■□□□ 13.8
XRN2Q9H0D6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.153e-13■■□□□ 13.8
XRN2Q9H0D6 SLC26A11-204ENST00000571072 561 ntTSL 221.81■■□□□ 1.085e-6■■□□□ 13.8
XRN2Q9H0D6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.8■■□□□ 1.083e-13■■□□□ 13.8
XRN2Q9H0D6 VWCE-204ENST00000535599 883 ntTSL 221.52■■□□□ 1.045e-6■■□□□ 13.8
XRN2Q9H0D6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.86■□□□□ 0.933e-13■■□□□ 13.8
XRN2Q9H0D6 TFEB-209ENST00000419396 914 ntTSL 520.66■□□□□ 0.94e-6■■□□□ 13.8
XRN2Q9H0D6 TNPO2-205ENST00000586775 945 ntTSL 318.59■□□□□ 0.575e-6■■□□□ 13.8
XRN2Q9H0D6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.514e-6■■□□□ 13.8
XRN2Q9H0D6 GPRC5C-206ENST00000482723 2317 ntTSL 217.06■□□□□ 0.323e-13■■□□□ 13.8
XRN2Q9H0D6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.033e-13■■□□□ 13.8
XRN2Q9H0D6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.031e-6■■□□□ 13.8
XRN2Q9H0D6 TNPO2-211ENST00000588484 545 ntTSL 311.76□□□□□ -0.535e-6■■□□□ 13.8
XRN2Q9H0D6 WDR43-205ENST00000446643 579 ntTSL 410.27□□□□□ -0.776e-7■■□□□ 13.8
XRN2Q9H0D6 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.35□□□□□ -0.111e-14■■□□□ 13.8
XRN2Q9H0D6 LINC01341-204ENST00000505748 595 ntTSL 4 BASIC11.13□□□□□ -0.631e-14■■□□□ 13.8
XRN2Q9H0D6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.393e-6■■□□□ 13.8
XRN2Q9H0D6 NEU4-211ENST00000435855 2281 ntTSL 221.02■□□□□ 0.963e-6■■□□□ 13.8
XRN2Q9H0D6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.953e-6■■□□□ 13.8
XRN2Q9H0D6 NEU4-217ENST00000618597 3013 ntTSL 219.33■□□□□ 0.683e-6■■□□□ 13.8
XRN2Q9H0D6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.35■■□□□ 1.178e-7■■□□□ 13.8
XRN2Q9H0D6 ATG4B-201ENST00000344376 1566 ntTSL 519.04■□□□□ 0.648e-7■■□□□ 13.8
XRN2Q9H0D6 ATG4B-225ENST00000494465 2365 ntTSL 517.28■□□□□ 0.368e-7■■□□□ 13.8
XRN2Q9H0D6 ATG4B-220ENST00000482507 2414 ntTSL 1 (best)15.19■□□□□ 0.028e-7■■□□□ 13.8
XRN2Q9H0D6 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.76□□□□□ -0.058e-7■■□□□ 13.8
XRN2Q9H0D6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.058e-7■■□□□ 13.8
XRN2Q9H0D6 SEPT9-229ENST00000590576 583 ntTSL 324.18■■□□□ 1.466e-7■■□□□ 13.8
XRN2Q9H0D6 SEPT9-217ENST00000587237 548 ntTSL 517.31■□□□□ 0.366e-7■■□□□ 13.8
XRN2Q9H0D6 ACSF2-218ENST00000510410 1745 ntTSL 225.54■■□□□ 1.681e-6■■□□□ 13.8
XRN2Q9H0D6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.46■■□□□ 1.191e-6■■□□□ 13.8
XRN2Q9H0D6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.2■■□□□ 1.141e-6■■□□□ 13.8
XRN2Q9H0D6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.471e-6■■□□□ 13.8
XRN2Q9H0D6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.62■□□□□ 0.251e-6■■□□□ 13.8
XRN2Q9H0D6 SEPT9-212ENST00000586128 752 ntTSL 416.96■□□□□ 0.311e-6■■□□□ 13.8
XRN2Q9H0D6 PVT1-210ENST00000521122 221 ntTSL 311.82□□□□□ -0.527e-6■■□□□ 13.8
XRN2Q9H0D6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.076e-6■■□□□ 13.8
XRN2Q9H0D6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.726e-9■■□□□ 13.8
XRN2Q9H0D6 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.36□□□□□ -0.276e-9■■□□□ 13.8
XRN2Q9H0D6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.462e-8■■□□□ 13.8
XRN2Q9H0D6 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.012e-8■■□□□ 13.8
XRN2Q9H0D6 FAM178B-202ENST00000470789 722 ntTSL 1 (best)13.3□□□□□ -0.282e-8■■□□□ 13.8
XRN2Q9H0D6 LGALS3BP-212ENST00000588899 668 ntTSL 319.64■□□□□ 0.731e-9■■□□□ 13.8
XRN2Q9H0D6 LGALS3BP-213ENST00000588990 618 ntTSL 519.4■□□□□ 0.71e-9■■□□□ 13.8
XRN2Q9H0D6 LGALS3BP-217ENST00000591274 379 ntTSL 518.23■□□□□ 0.511e-9■■□□□ 13.8
XRN2Q9H0D6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.424e-6■■□□□ 13.8
XRN2Q9H0D6 TMEM45B-204ENST00000527754 888 ntTSL 58.86□□□□□ -0.994e-6■■□□□ 13.8
XRN2Q9H0D6 TMEM45B-205ENST00000529381 515 ntTSL 28.03□□□□□ -1.124e-6■■□□□ 13.8
XRN2Q9H0D6 FLNA-210ENST00000462590 1026 ntTSL 1 (best)16.56■□□□□ 0.246e-7■■□□□ 13.8
XRN2Q9H0D6 TXNIP-203ENST00000488537 1509 ntTSL 58.22□□□□□ -1.092e-7■■□□□ 13.8
XRN2Q9H0D6 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.192e-7■■□□□ 13.8
XRN2Q9H0D6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.9□□□□□ -1.32e-7■■□□□ 13.8
XRN2Q9H0D6 PKP4-205ENST00000426248 4134 ntTSL 1 (best)16.35■□□□□ 0.214e-7■■□□□ 13.8
XRN2Q9H0D6 MAN2A2-221ENST00000560451 5124 ntTSL 1 (best)19.86■□□□□ 0.776e-7■■□□□ 13.8
XRN2Q9H0D6 CNOT1-215ENST00000569020 535 ntTSL 416.62■□□□□ 0.255e-7■■□□□ 13.8
XRN2Q9H0D6 CNOT1-206ENST00000564557 582 ntTSL 316.05■□□□□ 0.165e-7■■□□□ 13.8
XRN2Q9H0D6 CNOT1-220ENST00000569916 599 ntTSL 315.4■□□□□ 0.065e-7■■□□□ 13.8
XRN2Q9H0D6 CNOT1-213ENST00000568158 496 ntTSL 315.13■□□□□ 0.015e-7■■□□□ 13.8
XRN2Q9H0D6 CNOT1-217ENST00000569263 304 ntTSL 214.95□□□□□ -0.025e-7■■□□□ 13.8
XRN2Q9H0D6 CNOT1-207ENST00000565605 739 ntTSL 411.42□□□□□ -0.585e-7■■□□□ 13.8
XRN2Q9H0D6 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.35e-7■■□□□ 13.8
XRN2Q9H0D6 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.53□□□□□ -1.365e-7■■□□□ 13.8
XRN2Q9H0D6 CNOT1-211ENST00000567188 7830 ntTSL 1 (best)6.07□□□□□ -1.445e-7■■□□□ 13.8
XRN2Q9H0D6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.715e-7■■□□□ 13.8
XRN2Q9H0D6 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.79□□□□□ -1.322e-6■■□□□ 13.8
XRN2Q9H0D6 CNOT6-206ENST00000510148 456 ntTSL 430.16■■■□□ 2.422e-8■■□□□ 13.7
XRN2Q9H0D6 CNOT6-205ENST00000507016 382 ntTSL 328.1■■■□□ 2.092e-8■■□□□ 13.7
XRN2Q9H0D6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.62e-8■■□□□ 13.7
XRN2Q9H0D6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.532e-8■■□□□ 13.7
XRN2Q9H0D6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.32e-8■■□□□ 13.7
XRN2Q9H0D6 TNS3-208ENST00000457718 3836 ntTSL 510.61□□□□□ -0.717e-7■■□□□ 13.7
XRN2Q9H0D6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.041e-6■■□□□ 13.7
XRN2Q9H0D6 ZNF644-208ENST00000482467 710 ntTSL 520.73■□□□□ 0.915e-8■■□□□ 13.7
XRN2Q9H0D6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.91■□□□□ 0.623e-6■■□□□ 13.7
XRN2Q9H0D6 ASXL1-205ENST00000497249 296 ntTSL 53.1□□□□□ -1.913e-6■■□□□ 13.7
XRN2Q9H0D6 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.34■□□□□ 0.211e-6■■□□□ 13.7
XRN2Q9H0D6 FTX-211ENST00000603672 1077 ntTSL 515.99■□□□□ 0.151e-6■■□□□ 13.7
XRN2Q9H0D6 FTX-209ENST00000602812 2356 ntTSL 1 (best)10.6□□□□□ -0.711e-6■■□□□ 13.7
XRN2Q9H0D6 FTX-215ENST00000638681 9771 ntTSL 5 BASIC9.44□□□□□ -0.91e-6■■□□□ 13.7
XRN2Q9H0D6 FTX-206ENST00000602420 751 ntTSL 36.99□□□□□ -1.291e-6■■□□□ 13.7
XRN2Q9H0D6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.22□□□□□ -1.571e-6■■□□□ 13.7
XRN2Q9H0D6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.06■□□□□ 0.482e-6■■□□□ 13.7
XRN2Q9H0D6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.472e-23■■□□□ 13.7
XRN2Q9H0D6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.84■■□□□ 1.412e-23■■□□□ 13.7
XRN2Q9H0D6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.362e-23■■□□□ 13.7
XRN2Q9H0D6 ACTG1-204ENST00000571721 813 ntTSL 522.75■■□□□ 1.232e-10■■□□□ 13.7
XRN2Q9H0D6 ACTG1-209ENST00000575659 742 ntTSL 320.79■□□□□ 0.922e-10■■□□□ 13.7
XRN2Q9H0D6 ACTG1-203ENST00000571691 761 ntTSL 316.14■□□□□ 0.172e-10■■□□□ 13.7
XRN2Q9H0D6 ACTG1-202ENST00000570382 471 ntTSL 415.33■□□□□ 0.042e-10■■□□□ 13.7
XRN2Q9H0D6 ACTG1-213ENST00000576214 1024 ntTSL 515.31■□□□□ 0.042e-10■■□□□ 13.7
XRN2Q9H0D6 ACTG1-211ENST00000575994 856 ntTSL 315.3■□□□□ 0.042e-10■■□□□ 13.7
XRN2Q9H0D6 BRD2-206ENST00000456339 887 ntTSL 418.34■□□□□ 0.536e-7■■□□□ 13.7
XRN2Q9H0D6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.236e-7■■□□□ 13.7
XRN2Q9H0D6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.016e-7■■□□□ 13.7
XRN2Q9H0D6 BRD2-212ENST00000482914 4834 ntTSL 1 (best)13.76□□□□□ -0.216e-7■■□□□ 13.7
XRN2Q9H0D6 BRD2-213ENST00000495733 3404 ntTSL 213.62□□□□□ -0.236e-7■■□□□ 13.7
XRN2Q9H0D6 BRD2-219ENST00000607833 2338 ntAPPRIS ALT2 TSL 1 (best)12.5□□□□□ -0.416e-7■■□□□ 13.7
XRN2Q9H0D6 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.766e-7■■□□□ 13.7
XRN2Q9H0D6 EIF4G1-237ENST00000485712 474 ntTSL 421.19■□□□□ 0.983e-9■■□□□ 13.7
Retrieved 100 of 21,068 protein–RNA pairs in 160.8 ms