Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 HCG4B-203ENST00000450128 991 ntBASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 AC092865.5-201ENST00000545435 363 ntBASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRNKL1Q9BZJ0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CRNKL1Q9BZJ0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.58■□□□□ 0.88
CRNKL1Q9BZJ0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CRNKL1Q9BZJ0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CRNKL1Q9BZJ0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CRNKL1Q9BZJ0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CRNKL1Q9BZJ0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CRNKL1Q9BZJ0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CRNKL1Q9BZJ0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 KRT18P2-201ENST00000447938 1258 ntBASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRNKL1Q9BZJ0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CRNKL1Q9BZJ0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 OR7E47P-204ENST00000575924 449 ntBASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 AL138688.1-201ENST00000624851 1594 ntBASIC20.55■□□□□ 0.88
CRNKL1Q9BZJ0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms