Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
VGLL1Q99990 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.2□□□□□ -0.3
VGLL1Q99990 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.2□□□□□ -0.3
VGLL1Q99990 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VGLL1Q99990 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.2□□□□□ -0.3
VGLL1Q99990 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VGLL1Q99990 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.2□□□□□ -0.3
VGLL1Q99990 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VGLL1Q99990 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VGLL1Q99990 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
VGLL1Q99990 AC116353.5-201ENST00000638148 1699 ntBASIC13.19□□□□□ -0.3
VGLL1Q99990 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.19□□□□□ -0.3
VGLL1Q99990 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.19□□□□□ -0.3
VGLL1Q99990 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.19□□□□□ -0.3
VGLL1Q99990 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
VGLL1Q99990 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.19□□□□□ -0.3
VGLL1Q99990 AC066615.1-201ENST00000640911 628 ntBASIC13.19□□□□□ -0.3
VGLL1Q99990 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.19□□□□□ -0.3
VGLL1Q99990 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
VGLL1Q99990 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
VGLL1Q99990 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.19□□□□□ -0.3
VGLL1Q99990 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
VGLL1Q99990 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
VGLL1Q99990 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.19□□□□□ -0.3
VGLL1Q99990 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
VGLL1Q99990 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.19□□□□□ -0.3
VGLL1Q99990 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
VGLL1Q99990 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 AC005915.1-201ENST00000624912 2018 ntBASIC13.18□□□□□ -0.3
VGLL1Q99990 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.18□□□□□ -0.3
VGLL1Q99990 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.18□□□□□ -0.3
VGLL1Q99990 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.18□□□□□ -0.3
VGLL1Q99990 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.18□□□□□ -0.3
VGLL1Q99990 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.18□□□□□ -0.3
VGLL1Q99990 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
VGLL1Q99990 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
VGLL1Q99990 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
VGLL1Q99990 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VGLL1Q99990 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms