Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 SIGLEC16-201ENST00000599858 1437 ntBASIC20.54■□□□□ 0.88
NEK1Q96PY6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.54■□□□□ 0.88
NEK1Q96PY6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 TSPY19P-201ENST00000418461 509 ntBASIC20.54■□□□□ 0.88
NEK1Q96PY6 TSPY18P-201ENST00000441642 509 ntBASIC20.54■□□□□ 0.88
NEK1Q96PY6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.54■□□□□ 0.88
NEK1Q96PY6 KRT18P31-201ENST00000506277 1292 ntBASIC20.54■□□□□ 0.88
NEK1Q96PY6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.54■□□□□ 0.88
NEK1Q96PY6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.54■□□□□ 0.88
NEK1Q96PY6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.54■□□□□ 0.88
NEK1Q96PY6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.54■□□□□ 0.88
NEK1Q96PY6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.54■□□□□ 0.88
NEK1Q96PY6 AL121772.3-201ENST00000610840 674 ntBASIC20.54■□□□□ 0.88
NEK1Q96PY6 AC073592.4-201ENST00000623827 446 ntBASIC20.54■□□□□ 0.88
NEK1Q96PY6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.54■□□□□ 0.88
NEK1Q96PY6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
NEK1Q96PY6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 PRORSD1P-202ENST00000563365 2154 ntBASIC20.53■□□□□ 0.88
NEK1Q96PY6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK1Q96PY6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK1Q96PY6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK1Q96PY6 AC079776.2-201ENST00000641154 1609 ntBASIC20.53■□□□□ 0.88
NEK1Q96PY6 AC060834.1-201ENST00000443027 2032 ntBASIC20.53■□□□□ 0.88
NEK1Q96PY6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK1Q96PY6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK1Q96PY6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK1Q96PY6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK1Q96PY6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK1Q96PY6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK1Q96PY6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.53■□□□□ 0.88
NEK1Q96PY6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.53■□□□□ 0.88
NEK1Q96PY6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.53■□□□□ 0.88
NEK1Q96PY6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.53■□□□□ 0.88
NEK1Q96PY6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK1Q96PY6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.53■□□□□ 0.88
NEK1Q96PY6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.53■□□□□ 0.88
NEK1Q96PY6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NEK1Q96PY6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK1Q96PY6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NEK1Q96PY6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.53■□□□□ 0.88
NEK1Q96PY6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK1Q96PY6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK1Q96PY6 AC092053.1-201ENST00000605787 1936 ntBASIC20.53■□□□□ 0.88
NEK1Q96PY6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.52■□□□□ 0.88
NEK1Q96PY6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEK1Q96PY6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEK1Q96PY6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEK1Q96PY6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEK1Q96PY6 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEK1Q96PY6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEK1Q96PY6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEK1Q96PY6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NEK1Q96PY6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEK1Q96PY6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.52■□□□□ 0.88
NEK1Q96PY6 AL450487.1-201ENST00000426799 995 ntBASIC20.52■□□□□ 0.88
NEK1Q96PY6 DUSP5P1-201ENST00000441325 1139 ntBASIC20.52■□□□□ 0.88
NEK1Q96PY6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.52■□□□□ 0.88
NEK1Q96PY6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.52■□□□□ 0.88
NEK1Q96PY6 AC106795.1-205ENST00000512851 1056 ntBASIC20.52■□□□□ 0.88
NEK1Q96PY6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.52■□□□□ 0.88
NEK1Q96PY6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.52■□□□□ 0.88
NEK1Q96PY6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
NEK1Q96PY6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.52■□□□□ 0.88
NEK1Q96PY6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEK1Q96PY6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEK1Q96PY6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEK1Q96PY6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.52■□□□□ 0.87
NEK1Q96PY6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.52■□□□□ 0.87
NEK1Q96PY6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
NEK1Q96PY6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
NEK1Q96PY6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.52■□□□□ 0.87
NEK1Q96PY6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NEK1Q96PY6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NEK1Q96PY6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
NEK1Q96PY6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.51■□□□□ 0.87
NEK1Q96PY6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.51■□□□□ 0.87
NEK1Q96PY6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NEK1Q96PY6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.51■□□□□ 0.87
NEK1Q96PY6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.51■□□□□ 0.87
NEK1Q96PY6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.51■□□□□ 0.87
NEK1Q96PY6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NEK1Q96PY6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms