Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 AC074386.1-202ENST00000463561 864 ntBASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 AC023141.13-201ENST00000604991 943 ntBASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 AC025580.3-201ENST00000617932 1424 ntBASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 AL645939.2-201ENST00000427340 991 ntBASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 AP000344.2-201ENST00000512987 629 ntBASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 AC068880.1-201ENST00000507289 2297 ntBASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNGAP1Q96PV0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 FAM58CP-201ENST00000435741 640 ntBASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 AC027612.4-201ENST00000605371 583 ntBASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 AL590787.1-201ENST00000568856 1315 ntBASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.65■□□□□ 0.74
SYNGAP1Q96PV0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SYNGAP1Q96PV0 PI4KAP1-204ENST00000612579 1703 ntBASIC19.64■□□□□ 0.74
SYNGAP1Q96PV0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SYNGAP1Q96PV0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SYNGAP1Q96PV0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SYNGAP1Q96PV0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SYNGAP1Q96PV0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SYNGAP1Q96PV0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SYNGAP1Q96PV0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SYNGAP1Q96PV0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
SYNGAP1Q96PV0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.64■□□□□ 0.73
SYNGAP1Q96PV0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms