Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 BCRP1-201ENST00000444246 691 ntBASIC20.28■□□□□ 0.84
TRIM47Q96LD4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 IGHV3-65-201ENST00000523210 341 ntBASIC20.28■□□□□ 0.84
TRIM47Q96LD4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 AC004790.2-201ENST00000623588 572 ntBASIC20.28■□□□□ 0.84
TRIM47Q96LD4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 AC073592.5-201ENST00000624854 528 ntBASIC20.28■□□□□ 0.84
TRIM47Q96LD4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 KRT8P47-201ENST00000604727 1398 ntBASIC20.28■□□□□ 0.84
TRIM47Q96LD4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM47Q96LD4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 AL096828.2-201ENST00000567259 1965 ntBASIC20.27■□□□□ 0.84
TRIM47Q96LD4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 IGLL3P-201ENST00000412472 434 ntBASIC20.27■□□□□ 0.84
TRIM47Q96LD4 TSEN15P1-201ENST00000423257 515 ntBASIC20.27■□□□□ 0.84
TRIM47Q96LD4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 AL096865.1-201ENST00000606796 927 ntBASIC20.27■□□□□ 0.84
TRIM47Q96LD4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM47Q96LD4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.27■□□□□ 0.83
TRIM47Q96LD4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.27■□□□□ 0.83
TRIM47Q96LD4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM47Q96LD4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
TRIM47Q96LD4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
TRIM47Q96LD4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM47Q96LD4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.27■□□□□ 0.83
TRIM47Q96LD4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM47Q96LD4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 AC132938.6-201ENST00000623828 1655 ntBASIC20.26■□□□□ 0.83
TRIM47Q96LD4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.26■□□□□ 0.83
TRIM47Q96LD4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 AC008667.4-201ENST00000607370 168 ntBASIC20.26■□□□□ 0.83
TRIM47Q96LD4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 PHGDH-209ENST00000641074 1780 ntBASIC20.26■□□□□ 0.83
TRIM47Q96LD4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM47Q96LD4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 OR6D1P-202ENST00000641007 5290 ntBASIC20.25■□□□□ 0.83
TRIM47Q96LD4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM47Q96LD4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms