Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 AL356309.3-201ENST00000624132 1934 ntBASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 COX5BP2-201ENST00000392354 334 ntBASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SH3KBP1Q96B97 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 BX640515.1-201ENST00000617215 977 ntBASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 AP000867.4-201ENST00000641616 219 ntBASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SH3KBP1Q96B97 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
SH3KBP1Q96B97 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.21■□□□□ 0.34
SH3KBP1Q96B97 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SH3KBP1Q96B97 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
SH3KBP1Q96B97 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.21■□□□□ 0.34
SH3KBP1Q96B97 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.21■□□□□ 0.34
SH3KBP1Q96B97 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SH3KBP1Q96B97 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms