Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 RNF126P1-202ENST00000569893 925 ntBASIC15.62■□□□□ 0.09
PTP4A1Q93096 AL390719.2-201ENST00000606993 987 ntBASIC15.62■□□□□ 0.09
PTP4A1Q93096 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 RNF216P1-203ENST00000404404 2427 ntBASIC15.62■□□□□ 0.09
PTP4A1Q93096 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PTP4A1Q93096 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PTP4A1Q93096 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 NTF6B-201ENST00000591913 560 ntBASIC15.61■□□□□ 0.09
PTP4A1Q93096 AC019129.2-201ENST00000609837 1235 ntBASIC15.61■□□□□ 0.09
PTP4A1Q93096 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTP4A1Q93096 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
PTP4A1Q93096 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.6■□□□□ 0.09
PTP4A1Q93096 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PTP4A1Q93096 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.6■□□□□ 0.09
PTP4A1Q93096 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.6■□□□□ 0.09
PTP4A1Q93096 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.6■□□□□ 0.09
PTP4A1Q93096 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.6■□□□□ 0.09
PTP4A1Q93096 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.6■□□□□ 0.09
PTP4A1Q93096 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.6■□□□□ 0.09
PTP4A1Q93096 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.6■□□□□ 0.09
PTP4A1Q93096 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.6■□□□□ 0.09
PTP4A1Q93096 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.6■□□□□ 0.09
PTP4A1Q93096 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PTP4A1Q93096 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTP4A1Q93096 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms