Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.42■□□□□ 0.22
TM9SF4Q92544 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TM9SF4Q92544 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.42■□□□□ 0.22
TM9SF4Q92544 GMCL1P1-201ENST00000463439 1581 ntBASIC16.42■□□□□ 0.22
TM9SF4Q92544 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
TM9SF4Q92544 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TM9SF4Q92544 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.41■□□□□ 0.22
TM9SF4Q92544 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 OR6D1P-202ENST00000641007 5290 ntBASIC16.41■□□□□ 0.22
TM9SF4Q92544 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.41■□□□□ 0.22
TM9SF4Q92544 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.41■□□□□ 0.22
TM9SF4Q92544 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.41■□□□□ 0.22
TM9SF4Q92544 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TM9SF4Q92544 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.41■□□□□ 0.22
TM9SF4Q92544 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 FAM197Y3-203ENST00000618346 717 ntBASIC16.41■□□□□ 0.22
TM9SF4Q92544 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.41■□□□□ 0.22
TM9SF4Q92544 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TM9SF4Q92544 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.41■□□□□ 0.22
TM9SF4Q92544 AC104109.2-201ENST00000602919 1418 ntBASIC16.41■□□□□ 0.22
TM9SF4Q92544 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TM9SF4Q92544 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TM9SF4Q92544 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 AC097374.2-201ENST00000618617 1306 ntBASIC16.41■□□□□ 0.22
TM9SF4Q92544 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TM9SF4Q92544 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF4Q92544 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.41■□□□□ 0.22
TM9SF4Q92544 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 MED15P5-201ENST00000423150 992 ntBASIC16.4■□□□□ 0.22
TM9SF4Q92544 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 AC092910.1-201ENST00000482027 1129 ntBASIC16.4■□□□□ 0.22
TM9SF4Q92544 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.4■□□□□ 0.22
TM9SF4Q92544 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF4Q92544 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TM9SF4Q92544 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
TM9SF4Q92544 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF4Q92544 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF4Q92544 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
TM9SF4Q92544 AC006116.8-202ENST00000587620 1550 ntBASIC16.39■□□□□ 0.21
TM9SF4Q92544 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF4Q92544 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF4Q92544 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TM9SF4Q92544 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms