Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SNED1Q8TER0 AL139327.4-201ENST00000612362 153 ntBASIC20.91■□□□□ 0.94
SNED1Q8TER0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SNED1Q8TER0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNED1Q8TER0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.91■□□□□ 0.94
SNED1Q8TER0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNED1Q8TER0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
SNED1Q8TER0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.91■□□□□ 0.94
SNED1Q8TER0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
SNED1Q8TER0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNED1Q8TER0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.9■□□□□ 0.94
SNED1Q8TER0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNED1Q8TER0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNED1Q8TER0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SNED1Q8TER0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNED1Q8TER0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNED1Q8TER0 AC004890.2-204ENST00000481968 304 ntBASIC20.9■□□□□ 0.94
SNED1Q8TER0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNED1Q8TER0 SPDYE22P-201ENST00000582158 798 ntBASIC20.9■□□□□ 0.94
SNED1Q8TER0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
SNED1Q8TER0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.9■□□□□ 0.94
SNED1Q8TER0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNED1Q8TER0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNED1Q8TER0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNED1Q8TER0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNED1Q8TER0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.9■□□□□ 0.94
SNED1Q8TER0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNED1Q8TER0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.9■□□□□ 0.94
SNED1Q8TER0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNED1Q8TER0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNED1Q8TER0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNED1Q8TER0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.89■□□□□ 0.94
SNED1Q8TER0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SNED1Q8TER0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNED1Q8TER0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SNED1Q8TER0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SNED1Q8TER0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNED1Q8TER0 AC007274.1-201ENST00000439805 662 ntBASIC20.89■□□□□ 0.94
SNED1Q8TER0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.89■□□□□ 0.94
SNED1Q8TER0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNED1Q8TER0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SNED1Q8TER0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SNED1Q8TER0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.89■□□□□ 0.93
SNED1Q8TER0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNED1Q8TER0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SNED1Q8TER0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SNED1Q8TER0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNED1Q8TER0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNED1Q8TER0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.89■□□□□ 0.93
SNED1Q8TER0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.89■□□□□ 0.93
SNED1Q8TER0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.89■□□□□ 0.93
SNED1Q8TER0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.89■□□□□ 0.93
SNED1Q8TER0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNED1Q8TER0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.89■□□□□ 0.93
SNED1Q8TER0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SNED1Q8TER0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.88■□□□□ 0.93
SNED1Q8TER0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.88■□□□□ 0.93
SNED1Q8TER0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.88■□□□□ 0.93
SNED1Q8TER0 AC097493.3-201ENST00000509725 367 ntBASIC20.88■□□□□ 0.93
SNED1Q8TER0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.88■□□□□ 0.93
SNED1Q8TER0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.88■□□□□ 0.93
SNED1Q8TER0 AL161645.1-201ENST00000622716 1255 ntBASIC20.88■□□□□ 0.93
SNED1Q8TER0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.88■□□□□ 0.93
SNED1Q8TER0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.88■□□□□ 0.93
SNED1Q8TER0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.88■□□□□ 0.93
SNED1Q8TER0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.88■□□□□ 0.93
SNED1Q8TER0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SNED1Q8TER0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
SNED1Q8TER0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNED1Q8TER0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.88■□□□□ 0.93
SNED1Q8TER0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNED1Q8TER0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.87■□□□□ 0.93
SNED1Q8TER0 FLJ13224-201ENST00000313737 1514 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms