Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.21■□□□□ 0.51
SHKBP1Q8TBC3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
SHKBP1Q8TBC3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
SHKBP1Q8TBC3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 AL353135.1-201ENST00000606729 504 ntBASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHKBP1Q8TBC3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 AC002310.6-201ENST00000624451 1377 ntBASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 PTCHD3P3-201ENST00000403073 906 ntBASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 LINC00982-205ENST00000420957 435 ntBASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 GPR89P-201ENST00000407924 1495 ntBASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SHKBP1Q8TBC3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 IGLL3P-201ENST00000412472 434 ntBASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 AL513190.1-201ENST00000621254 727 ntBASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 AC079781.4-201ENST00000641908 219 ntBASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 AC134043.2-201ENST00000624206 2238 ntBASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHKBP1Q8TBC3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHKBP1Q8TBC3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms