Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 AL356309.3-201ENST00000624132 1934 ntBASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 MTCL1P1-201ENST00000446207 792 ntBASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 RASA4DP-201ENST00000460726 1199 ntBASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 AC124947.2-201ENST00000547118 1133 ntBASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 NFIC-211ENST00000641145 8399 ntBASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 AC068418.2-201ENST00000577309 3703 ntBASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 COX5BP2-201ENST00000392354 334 ntBASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 TSPY15P-201ENST00000457163 923 ntBASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
LRRTM1Q86UE6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.08■□□□□ 0.01
LRRTM1Q86UE6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRTM1Q86UE6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LRRTM1Q86UE6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
LRRTM1Q86UE6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRTM1Q86UE6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRTM1Q86UE6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRRTM1Q86UE6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM1Q86UE6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM1Q86UE6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.08■□□□□ 0
LRRTM1Q86UE6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM1Q86UE6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.08■□□□□ 0
LRRTM1Q86UE6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM1Q86UE6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM1Q86UE6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRRTM1Q86UE6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms