Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
MRPL55Q7Z7F7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 MIR662-201ENST00000384847 95 ntBASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 AK4P3-201ENST00000418260 669 ntBASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
MRPL55Q7Z7F7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
MRPL55Q7Z7F7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.2□□□□□ -0.62
MRPL55Q7Z7F7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms