Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCHD4Q6ZW05 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 AL391807.1-203ENST00000604392 2365 ntBASIC16■□□□□ 0.15
PTCHD4Q6ZW05 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 AC116353.5-201ENST00000638148 1699 ntBASIC16■□□□□ 0.15
PTCHD4Q6ZW05 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 AC024563.2-201ENST00000603282 481 ntBASIC16■□□□□ 0.15
PTCHD4Q6ZW05 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 AL603756.1-201ENST00000606511 2163 ntBASIC16■□□□□ 0.15
PTCHD4Q6ZW05 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16■□□□□ 0.15
PTCHD4Q6ZW05 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 CICP6-201ENST00000457191 2729 ntBASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 AL136038.4-201ENST00000603606 1261 ntBASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 AC140113.3-201ENST00000605663 199 ntBASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms