Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SWSAP1Q6NVH7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 KRT18P13-201ENST00000400056 1290 ntBASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 MRPL20P1-201ENST00000400819 433 ntBASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SWSAP1Q6NVH7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 AC023274.1-201ENST00000418278 595 ntBASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 BX842568.4-201ENST00000421222 227 ntBASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 HCG4B-203ENST00000450128 991 ntBASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SWSAP1Q6NVH7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SWSAP1Q6NVH7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SWSAP1Q6NVH7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SWSAP1Q6NVH7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SWSAP1Q6NVH7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SWSAP1Q6NVH7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SWSAP1Q6NVH7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.27■□□□□ 0.67
SWSAP1Q6NVH7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SWSAP1Q6NVH7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SWSAP1Q6NVH7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.27■□□□□ 0.67
SWSAP1Q6NVH7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 AC040169.1-201ENST00000565382 521 ntBASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 OR7E47P-204ENST00000575924 449 ntBASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 AC006538.3-201ENST00000612495 578 ntBASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.26■□□□□ 0.67
SWSAP1Q6NVH7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.25■□□□□ 0.67
SWSAP1Q6NVH7 GPALPP1-207ENST00000611650 899 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms