Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.14■□□□□ 0.01
CLDN12P56749 UBE2SP1-201ENST00000450587 669 ntBASIC15.14■□□□□ 0.01
CLDN12P56749 AC098590.1-201ENST00000468126 897 ntBASIC15.14■□□□□ 0.01
CLDN12P56749 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.14■□□□□ 0.01
CLDN12P56749 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 C2orf69P3-201ENST00000565542 1120 ntBASIC15.14■□□□□ 0.01
CLDN12P56749 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN12P56749 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN12P56749 PCDHB17P-201ENST00000539533 2393 ntBASIC15.14■□□□□ 0.01
CLDN12P56749 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN12P56749 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN12P56749 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN12P56749 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN12P56749 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CLDN12P56749 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN12P56749 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN12P56749 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLDN12P56749 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 AC006449.5-201ENST00000610658 2098 ntBASIC15.13■□□□□ 0.01
CLDN12P56749 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN12P56749 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CLDN12P56749 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN12P56749 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN12P56749 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLDN12P56749 SLC25A1P3-201ENST00000395415 828 ntBASIC15.13■□□□□ 0.01
CLDN12P56749 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN12P56749 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLDN12P56749 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN12P56749 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN12P56749 AC092068.3-201ENST00000587894 2016 ntBASIC15.13■□□□□ 0.01
CLDN12P56749 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN12P56749 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.13■□□□□ 0.01
CLDN12P56749 AL139327.4-201ENST00000612362 153 ntBASIC15.13■□□□□ 0.01
CLDN12P56749 AC093525.9-201ENST00000624961 1746 ntBASIC15.13■□□□□ 0.01
CLDN12P56749 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.13■□□□□ 0.01
CLDN12P56749 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLDN12P56749 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN12P56749 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN12P56749 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CLDN12P56749 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.13■□□□□ 0.01
CLDN12P56749 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLDN12P56749 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN12P56749 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN12P56749 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN12P56749 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN12P56749 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN12P56749 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN12P56749 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN12P56749 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN12P56749 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.12■□□□□ 0.01
CLDN12P56749 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN12P56749 Z99916.2-201ENST00000604037 246 ntBASIC15.12■□□□□ 0.01
CLDN12P56749 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.12■□□□□ 0.01
CLDN12P56749 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.12■□□□□ 0.01
CLDN12P56749 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLDN12P56749 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLDN12P56749 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms