Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.54■□□□□ 0.4
WNT3AP56704 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.54■□□□□ 0.4
WNT3AP56704 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.54■□□□□ 0.4
WNT3AP56704 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.54■□□□□ 0.4
WNT3AP56704 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.54■□□□□ 0.4
WNT3AP56704 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.54■□□□□ 0.4
WNT3AP56704 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.54■□□□□ 0.4
WNT3AP56704 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
WNT3AP56704 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.54■□□□□ 0.4
WNT3AP56704 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.54■□□□□ 0.4
WNT3AP56704 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
WNT3AP56704 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 PKD1P1-201ENST00000458669 6805 ntBASIC17.53■□□□□ 0.4
WNT3AP56704 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.53■□□□□ 0.4
WNT3AP56704 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.53■□□□□ 0.4
WNT3AP56704 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.53■□□□□ 0.4
WNT3AP56704 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.53■□□□□ 0.4
WNT3AP56704 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.53■□□□□ 0.4
WNT3AP56704 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.53■□□□□ 0.4
WNT3AP56704 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.53■□□□□ 0.4
WNT3AP56704 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.53■□□□□ 0.4
WNT3AP56704 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.53■□□□□ 0.4
WNT3AP56704 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.53■□□□□ 0.4
WNT3AP56704 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
WNT3AP56704 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.53■□□□□ 0.4
WNT3AP56704 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
WNT3AP56704 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.52■□□□□ 0.4
WNT3AP56704 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.52■□□□□ 0.4
WNT3AP56704 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.52■□□□□ 0.4
WNT3AP56704 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
WNT3AP56704 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.52■□□□□ 0.4
WNT3AP56704 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
WNT3AP56704 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT3AP56704 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
WNT3AP56704 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT3AP56704 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT3AP56704 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT3AP56704 RBM17P3-201ENST00000417687 1192 ntBASIC17.52■□□□□ 0.4
WNT3AP56704 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT3AP56704 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
WNT3AP56704 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.52■□□□□ 0.4
WNT3AP56704 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT3AP56704 AC004817.3-201ENST00000602957 2129 ntBASIC17.52■□□□□ 0.4
WNT3AP56704 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT3AP56704 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
WNT3AP56704 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
WNT3AP56704 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
WNT3AP56704 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
WNT3AP56704 LINC02012-201ENST00000608206 1725 ntBASIC17.52■□□□□ 0.39
WNT3AP56704 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
WNT3AP56704 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
WNT3AP56704 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.52■□□□□ 0.39
WNT3AP56704 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.52■□□□□ 0.39
WNT3AP56704 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
WNT3AP56704 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
WNT3AP56704 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.51■□□□□ 0.39
WNT3AP56704 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.51■□□□□ 0.39
WNT3AP56704 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
WNT3AP56704 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms