Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.18■□□□□ 0.98
RFX5P48382 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFX5P48382 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.18■□□□□ 0.98
RFX5P48382 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.18■□□□□ 0.98
RFX5P48382 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.18■□□□□ 0.98
RFX5P48382 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX5P48382 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX5P48382 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX5P48382 PCDHB18P-201ENST00000524813 2368 ntBASIC21.18■□□□□ 0.98
RFX5P48382 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX5P48382 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX5P48382 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.18■□□□□ 0.98
RFX5P48382 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX5P48382 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX5P48382 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFX5P48382 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX5P48382 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX5P48382 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX5P48382 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.18■□□□□ 0.98
RFX5P48382 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX5P48382 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFX5P48382 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.17■□□□□ 0.98
RFX5P48382 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.17■□□□□ 0.98
RFX5P48382 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RFX5P48382 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.17■□□□□ 0.98
RFX5P48382 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.17■□□□□ 0.98
RFX5P48382 CXCL1P1-201ENST00000502804 216 ntBASIC21.17■□□□□ 0.98
RFX5P48382 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 MAL2-202ENST00000531508 892 ntTSL 3 BASIC21.17■□□□□ 0.98
RFX5P48382 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.17■□□□□ 0.98
RFX5P48382 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.17■□□□□ 0.98
RFX5P48382 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX5P48382 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.16■□□□□ 0.98
RFX5P48382 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RFX5P48382 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX5P48382 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX5P48382 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX5P48382 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX5P48382 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX5P48382 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.16■□□□□ 0.98
RFX5P48382 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.16■□□□□ 0.98
RFX5P48382 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RFX5P48382 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.16■□□□□ 0.98
RFX5P48382 AC006538.3-201ENST00000612495 578 ntBASIC21.16■□□□□ 0.98
RFX5P48382 AC004877.2-201ENST00000623941 599 ntBASIC21.16■□□□□ 0.98
RFX5P48382 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX5P48382 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RFX5P48382 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX5P48382 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX5P48382 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RFX5P48382 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RFX5P48382 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX5P48382 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX5P48382 LINC02012-201ENST00000608206 1725 ntBASIC21.15■□□□□ 0.98
RFX5P48382 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX5P48382 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFX5P48382 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.15■□□□□ 0.98
RFX5P48382 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RFX5P48382 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RFX5P48382 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RFX5P48382 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX5P48382 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RFX5P48382 RPSAP43-201ENST00000402237 625 ntBASIC21.15■□□□□ 0.98
RFX5P48382 MCCD1P2-201ENST00000423228 335 ntBASIC21.15■□□□□ 0.98
RFX5P48382 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.15■□□□□ 0.98
RFX5P48382 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.15■□□□□ 0.98
RFX5P48382 AC092865.5-201ENST00000545435 363 ntBASIC21.15■□□□□ 0.98
RFX5P48382 KRT19P2-202ENST00000557173 1012 ntBASIC21.15■□□□□ 0.98
RFX5P48382 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.15■□□□□ 0.98
RFX5P48382 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.15■□□□□ 0.98
RFX5P48382 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX5P48382 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX5P48382 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RFX5P48382 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX5P48382 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX5P48382 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFX5P48382 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.15■□□□□ 0.98
RFX5P48382 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.15■□□□□ 0.98
RFX5P48382 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX5P48382 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.14■□□□□ 0.98
RFX5P48382 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.14■□□□□ 0.98
RFX5P48382 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.14■□□□□ 0.98
RFX5P48382 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFX5P48382 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms