Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCK1P35558 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.31■□□□□ 0.52
PCK1P35558 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.31■□□□□ 0.52
PCK1P35558 AC109462.3-201ENST00000573934 613 ntBASIC18.31■□□□□ 0.52
PCK1P35558 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCK1P35558 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.31■□□□□ 0.52
PCK1P35558 AL358472.4-201ENST00000633140 710 ntBASIC18.31■□□□□ 0.52
PCK1P35558 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.31■□□□□ 0.52
PCK1P35558 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCK1P35558 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCK1P35558 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCK1P35558 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.3■□□□□ 0.52
PCK1P35558 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.3■□□□□ 0.52
PCK1P35558 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCK1P35558 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCK1P35558 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.3■□□□□ 0.52
PCK1P35558 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.3■□□□□ 0.52
PCK1P35558 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCK1P35558 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.3■□□□□ 0.52
PCK1P35558 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.3■□□□□ 0.52
PCK1P35558 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCK1P35558 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.3■□□□□ 0.52
PCK1P35558 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.3■□□□□ 0.52
PCK1P35558 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.3■□□□□ 0.52
PCK1P35558 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCK1P35558 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.3■□□□□ 0.52
PCK1P35558 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.3■□□□□ 0.52
PCK1P35558 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
PCK1P35558 MIR3180-1-201ENST00000580374 94 ntBASIC18.3■□□□□ 0.52
PCK1P35558 MIR3180-3-201ENST00000584616 94 ntBASIC18.3■□□□□ 0.52
PCK1P35558 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.3■□□□□ 0.52
PCK1P35558 AC091076.1-201ENST00000610741 619 ntBASIC18.3■□□□□ 0.52
PCK1P35558 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCK1P35558 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.3■□□□□ 0.52
PCK1P35558 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCK1P35558 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCK1P35558 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.3■□□□□ 0.52
PCK1P35558 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.3■□□□□ 0.52
PCK1P35558 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.3■□□□□ 0.52
PCK1P35558 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCK1P35558 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.3■□□□□ 0.52
PCK1P35558 PKD1P5-201ENST00000532415 10291 ntBASIC18.3■□□□□ 0.52
PCK1P35558 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCK1P35558 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCK1P35558 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.3■□□□□ 0.52
PCK1P35558 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCK1P35558 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCK1P35558 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.29■□□□□ 0.52
PCK1P35558 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
PCK1P35558 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.29■□□□□ 0.52
PCK1P35558 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.29■□□□□ 0.52
PCK1P35558 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PCK1P35558 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.29■□□□□ 0.52
PCK1P35558 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.29■□□□□ 0.52
PCK1P35558 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 KRT17P6-201ENST00000453795 1220 ntBASIC18.29■□□□□ 0.52
PCK1P35558 TOB2P1-201ENST00000469761 992 ntBASIC18.29■□□□□ 0.52
PCK1P35558 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.29■□□□□ 0.52
PCK1P35558 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.29■□□□□ 0.52
PCK1P35558 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.29■□□□□ 0.52
PCK1P35558 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 AL445228.2-201ENST00000605589 952 ntBASIC18.29■□□□□ 0.52
PCK1P35558 NPAP1P7-201ENST00000613027 823 ntBASIC18.29■□□□□ 0.52
PCK1P35558 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.29■□□□□ 0.52
PCK1P35558 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.29■□□□□ 0.52
PCK1P35558 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.29■□□□□ 0.52
PCK1P35558 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PCK1P35558 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PCK1P35558 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PCK1P35558 AC046158.3-201ENST00000624947 2558 ntBASIC18.29■□□□□ 0.52
PCK1P35558 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCK1P35558 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.28■□□□□ 0.52
PCK1P35558 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PCK1P35558 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCK1P35558 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms