Protein–RNA interactions for Protein: P31941

APOBEC3A, DNA dC->dU-editing enzyme APOBEC-3A, humanhuman

Predicted RBP Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3AP31941 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 YBX2P1-201ENST00000394192 760 ntBASIC14.79□□□□□ -0.04
APOBEC3AP31941 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 UPF3AP3-201ENST00000420996 769 ntBASIC14.79□□□□□ -0.04
APOBEC3AP31941 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.79□□□□□ -0.04
APOBEC3AP31941 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 AL590787.1-201ENST00000568856 1315 ntBASIC14.79□□□□□ -0.04
APOBEC3AP31941 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 PI4KAP1-204ENST00000612579 1703 ntBASIC14.79□□□□□ -0.04
APOBEC3AP31941 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC3AP31941 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.79□□□□□ -0.04
APOBEC3AP31941 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 LINC00304-203ENST00000565008 1864 ntBASIC14.78□□□□□ -0.04
APOBEC3AP31941 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
APOBEC3AP31941 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC3AP31941 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC3AP31941 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
APOBEC3AP31941 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC3AP31941 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC3AP31941 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC3AP31941 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.77□□□□□ -0.04
APOBEC3AP31941 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC3AP31941 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.77□□□□□ -0.04
APOBEC3AP31941 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC3AP31941 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC3AP31941 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
APOBEC3AP31941 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.77□□□□□ -0.04
APOBEC3AP31941 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC3AP31941 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC3AP31941 AC002310.6-201ENST00000624451 1377 ntBASIC14.77□□□□□ -0.04
APOBEC3AP31941 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC3AP31941 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
APOBEC3AP31941 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC3AP31941 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC3AP31941 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC3AP31941 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms