Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.39■□□□□ 0.53
CHRNB2P17787 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.39■□□□□ 0.53
CHRNB2P17787 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNB2P17787 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNB2P17787 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
CHRNB2P17787 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNB2P17787 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
CHRNB2P17787 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CHRNB2P17787 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNB2P17787 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNB2P17787 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNB2P17787 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNB2P17787 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNB2P17787 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNB2P17787 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNB2P17787 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNB2P17787 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CHRNB2P17787 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNB2P17787 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CHRNB2P17787 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.38■□□□□ 0.53
CHRNB2P17787 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHRNB2P17787 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
CHRNB2P17787 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.38■□□□□ 0.53
CHRNB2P17787 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CHRNB2P17787 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.38■□□□□ 0.53
CHRNB2P17787 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 AL020989.1-201ENST00000422979 469 ntBASIC18.38■□□□□ 0.53
CHRNB2P17787 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.38■□□□□ 0.53
CHRNB2P17787 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.38■□□□□ 0.53
CHRNB2P17787 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.38■□□□□ 0.53
CHRNB2P17787 AC124947.2-201ENST00000547118 1133 ntBASIC18.38■□□□□ 0.53
CHRNB2P17787 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.38■□□□□ 0.53
CHRNB2P17787 AL591684.3-201ENST00000605187 298 ntBASIC18.38■□□□□ 0.53
CHRNB2P17787 AP001269.4-201ENST00000609611 512 ntBASIC18.38■□□□□ 0.53
CHRNB2P17787 AC073592.4-201ENST00000623827 446 ntBASIC18.38■□□□□ 0.53
CHRNB2P17787 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CHRNB2P17787 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 SIGLEC16-201ENST00000599858 1437 ntBASIC18.38■□□□□ 0.53
CHRNB2P17787 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.38■□□□□ 0.53
CHRNB2P17787 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.38■□□□□ 0.53
CHRNB2P17787 FRMD8P1-201ENST00000440433 1524 ntBASIC18.38■□□□□ 0.53
CHRNB2P17787 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CHRNB2P17787 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNB2P17787 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHRNB2P17787 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.37■□□□□ 0.53
CHRNB2P17787 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNB2P17787 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.37■□□□□ 0.53
CHRNB2P17787 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 FLJ38576-201ENST00000623820 2459 ntBASIC18.37■□□□□ 0.53
CHRNB2P17787 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CHRNB2P17787 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHRNB2P17787 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CHRNB2P17787 KRT16P4-201ENST00000453883 522 ntBASIC18.37■□□□□ 0.53
CHRNB2P17787 AC132008.2-207ENST00000454517 770 ntBASIC18.37■□□□□ 0.53
CHRNB2P17787 FOSL1P1-201ENST00000511041 816 ntBASIC18.37■□□□□ 0.53
CHRNB2P17787 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.37■□□□□ 0.53
CHRNB2P17787 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHRNB2P17787 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CHRNB2P17787 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CHRNB2P17787 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRNB2P17787 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CHRNB2P17787 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRNB2P17787 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNB2P17787 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNB2P17787 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNB2P17787 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRNB2P17787 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms