Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.95■□□□□ 0.3
CDH1P12830 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH1P12830 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH1P12830 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH1P12830 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH1P12830 INTS4P1-201ENST00000438455 1935 ntBASIC16.95■□□□□ 0.3
CDH1P12830 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH1P12830 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH1P12830 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDH1P12830 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CDH1P12830 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CDH1P12830 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CDH1P12830 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH1P12830 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH1P12830 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CDH1P12830 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDH1P12830 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDH1P12830 AC103564.2-201ENST00000432853 1299 ntBASIC16.94■□□□□ 0.3
CDH1P12830 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH1P12830 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH1P12830 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.94■□□□□ 0.3
CDH1P12830 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH1P12830 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH1P12830 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.94■□□□□ 0.3
CDH1P12830 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH1P12830 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH1P12830 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CDH1P12830 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CDH1P12830 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH1P12830 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH1P12830 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDH1P12830 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDH1P12830 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH1P12830 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CDH1P12830 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDH1P12830 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH1P12830 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CDH1P12830 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH1P12830 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH1P12830 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CDH1P12830 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH1P12830 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH1P12830 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH1P12830 IGHV3-52-201ENST00000519770 353 ntBASIC16.93■□□□□ 0.3
CDH1P12830 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH1P12830 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.93■□□□□ 0.3
CDH1P12830 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH1P12830 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH1P12830 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH1P12830 KRT8P10-201ENST00000450021 1447 ntBASIC16.93■□□□□ 0.3
CDH1P12830 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH1P12830 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 AL049757.1-201ENST00000616842 1596 ntBASIC16.93■□□□□ 0.3
CDH1P12830 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH1P12830 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH1P12830 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH1P12830 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CDH1P12830 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CDH1P12830 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms