Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.65■□□□□ 0.1
HLA-DPB1P04440 RASA4DP-201ENST00000460726 1199 ntBASIC15.65■□□□□ 0.1
HLA-DPB1P04440 AL359075.1-203ENST00000462729 1002 ntBASIC15.65■□□□□ 0.1
HLA-DPB1P04440 AC034232.1-201ENST00000506026 1064 ntBASIC15.65■□□□□ 0.1
HLA-DPB1P04440 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
HLA-DPB1P04440 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.64■□□□□ 0.1
HLA-DPB1P04440 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 SPDYE15P-201ENST00000424157 909 ntBASIC15.64■□□□□ 0.09
HLA-DPB1P04440 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.64■□□□□ 0.09
HLA-DPB1P04440 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DPB1P04440 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 AC092647.4-201ENST00000457211 535 ntBASIC15.63■□□□□ 0.09
HLA-DPB1P04440 DUX4L26-201ENST00000489078 1255 ntBASIC15.63■□□□□ 0.09
HLA-DPB1P04440 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
HLA-DPB1P04440 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms