Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.31■□□□□ 0.52
RTN3O95197 RPL13AP23-201ENST00000480739 586 ntBASIC18.31■□□□□ 0.52
RTN3O95197 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.31■□□□□ 0.52
RTN3O95197 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.31■□□□□ 0.52
RTN3O95197 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.31■□□□□ 0.52
RTN3O95197 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.31■□□□□ 0.52
RTN3O95197 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTN3O95197 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN3O95197 AF228730.7-201ENST00000641842 219 ntBASIC18.31■□□□□ 0.52
RTN3O95197 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
RTN3O95197 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN3O95197 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.31■□□□□ 0.52
RTN3O95197 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.31■□□□□ 0.52
RTN3O95197 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN3O95197 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.31■□□□□ 0.52
RTN3O95197 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RTN3O95197 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RTN3O95197 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.3■□□□□ 0.52
RTN3O95197 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.3■□□□□ 0.52
RTN3O95197 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.3■□□□□ 0.52
RTN3O95197 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.3■□□□□ 0.52
RTN3O95197 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.3■□□□□ 0.52
RTN3O95197 AL356488.2-201ENST00000602755 427 ntBASIC18.3■□□□□ 0.52
RTN3O95197 AC004706.3-202ENST00000621574 984 ntBASIC18.3■□□□□ 0.52
RTN3O95197 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.3■□□□□ 0.52
RTN3O95197 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 AP002414.3-201ENST00000589352 1468 ntBASIC18.3■□□□□ 0.52
RTN3O95197 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.3■□□□□ 0.52
RTN3O95197 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.3■□□□□ 0.52
RTN3O95197 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RTN3O95197 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.3■□□□□ 0.52
RTN3O95197 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.3■□□□□ 0.52
RTN3O95197 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 ZNF259P1-201ENST00000407656 1365 ntBASIC18.3■□□□□ 0.52
RTN3O95197 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RTN3O95197 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.29■□□□□ 0.52
RTN3O95197 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RTN3O95197 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.29■□□□□ 0.52
RTN3O95197 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 AC090340.1-201ENST00000620778 4980 ntBASIC18.29■□□□□ 0.52
RTN3O95197 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.29■□□□□ 0.52
RTN3O95197 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.29■□□□□ 0.52
RTN3O95197 LINC00304-203ENST00000565008 1864 ntBASIC18.29■□□□□ 0.52
RTN3O95197 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.29■□□□□ 0.52
RTN3O95197 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.29■□□□□ 0.52
RTN3O95197 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.29■□□□□ 0.52
RTN3O95197 AC136632.2-201ENST00000512891 861 ntBASIC18.29■□□□□ 0.52
RTN3O95197 SLC25A1P1-201ENST00000528351 927 ntBASIC18.29■□□□□ 0.52
RTN3O95197 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.29■□□□□ 0.52
RTN3O95197 AC145285.3-201ENST00000564603 959 ntBASIC18.29■□□□□ 0.52
RTN3O95197 AC106730.1-201ENST00000566722 1090 ntBASIC18.29■□□□□ 0.52
RTN3O95197 AL139327.4-201ENST00000612362 153 ntBASIC18.29■□□□□ 0.52
RTN3O95197 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RTN3O95197 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.29■□□□□ 0.52
RTN3O95197 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.29■□□□□ 0.52
RTN3O95197 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.29■□□□□ 0.52
RTN3O95197 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RTN3O95197 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RTN3O95197 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RTN3O95197 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RTN3O95197 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms