Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH16O75309 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH16O75309 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH16O75309 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH16O75309 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH16O75309 AC096633.1-201ENST00000422446 749 ntBASIC17.57■□□□□ 0.4
CDH16O75309 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH16O75309 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH16O75309 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH16O75309 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH16O75309 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH16O75309 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH16O75309 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH16O75309 AC004263.2-201ENST00000617183 678 ntBASIC17.57■□□□□ 0.4
CDH16O75309 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH16O75309 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.57■□□□□ 0.4
CDH16O75309 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH16O75309 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH16O75309 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH16O75309 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH16O75309 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDH16O75309 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH16O75309 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH16O75309 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH16O75309 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH16O75309 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH16O75309 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH16O75309 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CDH16O75309 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH16O75309 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH16O75309 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CDH16O75309 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 AC034232.1-201ENST00000506026 1064 ntBASIC17.56■□□□□ 0.4
CDH16O75309 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH16O75309 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH16O75309 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH16O75309 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.56■□□□□ 0.4
CDH16O75309 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.56■□□□□ 0.4
CDH16O75309 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH16O75309 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDH16O75309 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH16O75309 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CDH16O75309 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH16O75309 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH16O75309 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH16O75309 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH16O75309 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH16O75309 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH16O75309 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDH16O75309 MYCLP1-201ENST00000372451 1075 ntBASIC17.55■□□□□ 0.4
CDH16O75309 HMGA1P5-201ENST00000412453 271 ntBASIC17.55■□□□□ 0.4
CDH16O75309 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.55■□□□□ 0.4
CDH16O75309 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CDH16O75309 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDH16O75309 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH16O75309 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH16O75309 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDH16O75309 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDH16O75309 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH16O75309 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH16O75309 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.55■□□□□ 0.4
CDH16O75309 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH16O75309 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH16O75309 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDH16O75309 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH16O75309 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH16O75309 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH16O75309 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.55■□□□□ 0.4
CDH16O75309 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH16O75309 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDH16O75309 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
CDH16O75309 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDH16O75309 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDH16O75309 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.54■□□□□ 0.4
CDH16O75309 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms