Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUX1O43812 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUX1O43812 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUX1O43812 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.59■□□□□ 0.25
DUX1O43812 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.59■□□□□ 0.25
DUX1O43812 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
DUX1O43812 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.59■□□□□ 0.25
DUX1O43812 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.59■□□□□ 0.25
DUX1O43812 AC027796.2-201ENST00000575326 344 ntBASIC16.59■□□□□ 0.25
DUX1O43812 AC023141.13-201ENST00000604991 943 ntBASIC16.59■□□□□ 0.25
DUX1O43812 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.59■□□□□ 0.25
DUX1O43812 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUX1O43812 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUX1O43812 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUX1O43812 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
DUX1O43812 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
DUX1O43812 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUX1O43812 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
DUX1O43812 AC006116.8-202ENST00000587620 1550 ntBASIC16.59■□□□□ 0.25
DUX1O43812 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUX1O43812 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DUX1O43812 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUX1O43812 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
DUX1O43812 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
DUX1O43812 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.58■□□□□ 0.25
DUX1O43812 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
DUX1O43812 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
DUX1O43812 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
DUX1O43812 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
DUX1O43812 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUX1O43812 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DUX1O43812 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
DUX1O43812 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.58■□□□□ 0.24
DUX1O43812 ALG1L5P-201ENST00000482043 771 ntBASIC16.58■□□□□ 0.24
DUX1O43812 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.58■□□□□ 0.24
DUX1O43812 CXCL1P1-201ENST00000502804 216 ntBASIC16.58■□□□□ 0.24
DUX1O43812 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.58■□□□□ 0.24
DUX1O43812 KRT19P2-202ENST00000557173 1012 ntBASIC16.58■□□□□ 0.24
DUX1O43812 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.58■□□□□ 0.24
DUX1O43812 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.58■□□□□ 0.24
DUX1O43812 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
DUX1O43812 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUX1O43812 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
DUX1O43812 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.58■□□□□ 0.24
DUX1O43812 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUX1O43812 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.58■□□□□ 0.24
DUX1O43812 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUX1O43812 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DUX1O43812 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.58■□□□□ 0.24
DUX1O43812 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.58■□□□□ 0.24
DUX1O43812 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
DUX1O43812 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.58■□□□□ 0.24
DUX1O43812 AC012317.2-201ENST00000623305 2251 ntBASIC16.58■□□□□ 0.24
DUX1O43812 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUX1O43812 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUX1O43812 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUX1O43812 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.58■□□□□ 0.24
DUX1O43812 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUX1O43812 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUX1O43812 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.57■□□□□ 0.24
DUX1O43812 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.57■□□□□ 0.24
DUX1O43812 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
DUX1O43812 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
DUX1O43812 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 MKNK2P1-201ENST00000437526 628 ntBASIC16.57■□□□□ 0.24
DUX1O43812 RHOQP3-201ENST00000437982 621 ntBASIC16.57■□□□□ 0.24
DUX1O43812 AP006288.1-201ENST00000446065 395 ntBASIC16.57■□□□□ 0.24
DUX1O43812 YBX1P5-201ENST00000509441 847 ntBASIC16.57■□□□□ 0.24
DUX1O43812 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.57■□□□□ 0.24
DUX1O43812 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.57■□□□□ 0.24
DUX1O43812 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
DUX1O43812 AL078644.1-201ENST00000609881 752 ntBASIC16.57■□□□□ 0.24
DUX1O43812 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX1O43812 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
DUX1O43812 LYSMD4-203ENST00000378904 2122 ntBASIC16.57■□□□□ 0.24
DUX1O43812 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
DUX1O43812 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DUX1O43812 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
DUX1O43812 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DUX1O43812 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
DUX1O43812 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
DUX1O43812 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.56■□□□□ 0.24
DUX1O43812 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DUX1O43812 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DUX1O43812 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DUX1O43812 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DUX1O43812 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms