Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 HMGA1P7-201ENST00000406908 502 ntBASIC18.57■□□□□ 0.56
TNRC18O15417 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.57■□□□□ 0.56
TNRC18O15417 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNRC18O15417 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNRC18O15417 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.57■□□□□ 0.56
TNRC18O15417 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNRC18O15417 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TNRC18O15417 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.57■□□□□ 0.56
TNRC18O15417 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.57■□□□□ 0.56
TNRC18O15417 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.57■□□□□ 0.56
TNRC18O15417 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNRC18O15417 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNRC18O15417 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNRC18O15417 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TNRC18O15417 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
TNRC18O15417 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TNRC18O15417 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNRC18O15417 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNRC18O15417 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.57■□□□□ 0.56
TNRC18O15417 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.57■□□□□ 0.56
TNRC18O15417 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNRC18O15417 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNRC18O15417 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TNRC18O15417 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TNRC18O15417 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
TNRC18O15417 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.57■□□□□ 0.56
TNRC18O15417 BTNL10-201ENST00000595971 695 ntBASIC18.57■□□□□ 0.56
TNRC18O15417 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNRC18O15417 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TNRC18O15417 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNRC18O15417 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNRC18O15417 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.56■□□□□ 0.56
TNRC18O15417 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.56■□□□□ 0.56
TNRC18O15417 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNRC18O15417 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNRC18O15417 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNRC18O15417 AC091046.1-201ENST00000331871 207 ntBASIC18.56■□□□□ 0.56
TNRC18O15417 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.56■□□□□ 0.56
TNRC18O15417 FO681548.1-201ENST00000455617 1132 ntBASIC18.56■□□□□ 0.56
TNRC18O15417 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.56■□□□□ 0.56
TNRC18O15417 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC18.56■□□□□ 0.56
TNRC18O15417 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.56■□□□□ 0.56
TNRC18O15417 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.56■□□□□ 0.56
TNRC18O15417 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.56■□□□□ 0.56
TNRC18O15417 CETN4P-206ENST00000642099 2168 ntBASIC18.56■□□□□ 0.56
TNRC18O15417 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNRC18O15417 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.56■□□□□ 0.56
TNRC18O15417 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNRC18O15417 AC142381.1-201ENST00000426099 345 ntBASIC18.56■□□□□ 0.56
TNRC18O15417 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.56■□□□□ 0.56
TNRC18O15417 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.56■□□□□ 0.56
TNRC18O15417 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.56■□□□□ 0.56
TNRC18O15417 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.56■□□□□ 0.56
TNRC18O15417 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TNRC18O15417 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.56■□□□□ 0.56
TNRC18O15417 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TNRC18O15417 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNRC18O15417 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TNRC18O15417 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.56■□□□□ 0.56
TNRC18O15417 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNRC18O15417 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.55■□□□□ 0.56
TNRC18O15417 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNRC18O15417 AC114501.2-201ENST00000439631 535 ntBASIC18.55■□□□□ 0.56
TNRC18O15417 AC114501.1-201ENST00000445949 172 ntBASIC18.55■□□□□ 0.56
TNRC18O15417 AP001258.2-201ENST00000529891 490 ntBASIC18.55■□□□□ 0.56
TNRC18O15417 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TNRC18O15417 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNRC18O15417 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.55■□□□□ 0.56
TNRC18O15417 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNRC18O15417 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.55■□□□□ 0.56
TNRC18O15417 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.55■□□□□ 0.56
TNRC18O15417 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.55■□□□□ 0.56
TNRC18O15417 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNRC18O15417 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNRC18O15417 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.55■□□□□ 0.56
TNRC18O15417 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TNRC18O15417 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TNRC18O15417 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.55■□□□□ 0.56
TNRC18O15417 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNRC18O15417 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TNRC18O15417 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNRC18O15417 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNRC18O15417 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.54■□□□□ 0.56
TNRC18O15417 AL627389.1-201ENST00000413508 1182 ntBASIC18.54■□□□□ 0.56
TNRC18O15417 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNRC18O15417 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TNRC18O15417 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNRC18O15417 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNRC18O15417 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNRC18O15417 CDC14C-201ENST00000428251 1719 ntBASIC18.54■□□□□ 0.56
TNRC18O15417 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNRC18O15417 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
TNRC18O15417 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNRC18O15417 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TNRC18O15417 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.54■□□□□ 0.56
TNRC18O15417 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TNRC18O15417 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.54■□□□□ 0.56
TNRC18O15417 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TNRC18O15417 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.54■□□□□ 0.56
TNRC18O15417 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms