Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
FOXN3O00409 UPK3BP1-201ENST00000428678 509 ntBASIC18.59■□□□□ 0.57
FOXN3O00409 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXN3O00409 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
FOXN3O00409 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.59■□□□□ 0.57
FOXN3O00409 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.59■□□□□ 0.57
FOXN3O00409 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
FOXN3O00409 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN3O00409 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN3O00409 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN3O00409 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN3O00409 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXN3O00409 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN3O00409 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN3O00409 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN3O00409 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN3O00409 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN3O00409 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXN3O00409 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXN3O00409 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
FOXN3O00409 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
FOXN3O00409 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
FOXN3O00409 OR6D1P-202ENST00000641007 5290 ntBASIC18.58■□□□□ 0.57
FOXN3O00409 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXN3O00409 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.58■□□□□ 0.57
FOXN3O00409 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXN3O00409 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXN3O00409 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN3O00409 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
FOXN3O00409 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
FOXN3O00409 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.58■□□□□ 0.56
FOXN3O00409 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
FOXN3O00409 NUS1P2-201ENST00000417358 873 ntBASIC18.58■□□□□ 0.56
FOXN3O00409 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXN3O00409 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN3O00409 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN3O00409 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.58■□□□□ 0.56
FOXN3O00409 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN3O00409 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXN3O00409 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXN3O00409 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.58■□□□□ 0.56
FOXN3O00409 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN3O00409 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.58■□□□□ 0.56
FOXN3O00409 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.58■□□□□ 0.56
FOXN3O00409 AC148477.5-201ENST00000625164 1645 ntBASIC18.58■□□□□ 0.56
FOXN3O00409 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN3O00409 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
FOXN3O00409 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN3O00409 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
FOXN3O00409 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN3O00409 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXN3O00409 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN3O00409 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXN3O00409 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXN3O00409 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
FOXN3O00409 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXN3O00409 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
FOXN3O00409 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
FOXN3O00409 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXN3O00409 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
FOXN3O00409 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
FOXN3O00409 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
FOXN3O00409 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.57■□□□□ 0.56
FOXN3O00409 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 ABCD1P5-201ENST00000445663 754 ntBASIC18.57■□□□□ 0.56
FOXN3O00409 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.57■□□□□ 0.56
FOXN3O00409 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
FOXN3O00409 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.57■□□□□ 0.56
FOXN3O00409 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
FOXN3O00409 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXN3O00409 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
FOXN3O00409 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
FOXN3O00409 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXN3O00409 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXN3O00409 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN3O00409 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
FOXN3O00409 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
FOXN3O00409 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN3O00409 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN3O00409 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXN3O00409 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN3O00409 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN3O00409 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN3O00409 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN3O00409 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXN3O00409 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.56■□□□□ 0.56
FOXN3O00409 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms