Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01546A6NGU7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 AL596087.1-201ENST00000400979 1969 ntBASIC12.25□□□□□ -0.45
LINC01546A6NGU7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 AC096633.1-201ENST00000422446 749 ntBASIC12.25□□□□□ -0.45
LINC01546A6NGU7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 AL162430.1-201ENST00000480705 870 ntBASIC12.25□□□□□ -0.45
LINC01546A6NGU7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 AC116562.2-201ENST00000507042 360 ntBASIC12.25□□□□□ -0.45
LINC01546A6NGU7 AC097488.1-201ENST00000507834 756 ntBASIC12.25□□□□□ -0.45
LINC01546A6NGU7 PPP1R14BP3-201ENST00000509033 445 ntBASIC12.25□□□□□ -0.45
LINC01546A6NGU7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 AL353719.1-201ENST00000566847 864 ntBASIC12.25□□□□□ -0.45
LINC01546A6NGU7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 AC009154.2-201ENST00000621177 724 ntBASIC12.25□□□□□ -0.45
LINC01546A6NGU7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC01546A6NGU7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 AC026366.1-201ENST00000488803 879 ntBASIC12.24□□□□□ -0.45
LINC01546A6NGU7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC01546A6NGU7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms