Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 AC116562.4-202ENST00000641738 218 ntBASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 AL356309.3-201ENST00000624132 1934 ntBASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRDV1A0A1B0GX56 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 AL365203.3-201ENST00000609742 2057 ntBASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.28■□□□□ 0.04
TRDV1A0A1B0GX56 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 FER1L4-210ENST00000615531 5998 ntBASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 AC010653.2-201ENST00000623505 997 ntBASIC15.27■□□□□ 0.04
TRDV1A0A1B0GX56 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TRDV1A0A1B0GX56 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms