Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 AC079602.3-201ENST00000623931 403 ntBASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 AC093525.9-201ENST00000624961 1746 ntBASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV5A0A0B4J249 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV5A0A0B4J249 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV5A0A0B4J249 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV5A0A0B4J249 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV5A0A0B4J249 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV5A0A0B4J249 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV5A0A0B4J249 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV5A0A0B4J249 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV5A0A0B4J249 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 SLC25A1P3-201ENST00000395415 828 ntBASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 KRT89P-201ENST00000620027 1478 ntBASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 AL391807.1-203ENST00000604392 2365 ntBASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV5A0A0B4J249 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 AC078925.2-201ENST00000624013 1973 ntBASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV5A0A0B4J249 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms