Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.83■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 RBM17P3-201ENST00000417687 1192 ntBASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 HLA-A-201ENST00000376802 1334 ntBASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 CROCCP2-202ENST00000412962 2773 ntBASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 SPDYE21P-201ENST00000413323 827 ntBASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 AL020989.1-201ENST00000422979 469 ntBASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 SIGLEC16-201ENST00000599858 1437 ntBASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 AC064862.7-201ENST00000604520 867 ntBASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 AL355877.3-201ENST00000622820 899 ntBASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 AC141586.5-201ENST00000624546 2050 ntBASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.8■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.8■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 AL023806.1-201ENST00000603994 1649 ntBASIC15.8■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TNFSF12-TNFSF13A0A0A6YY99 AC079776.2-201ENST00000641154 1609 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms