Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17■□□□□ 0.31
CSNK1G3Q9Y6M4 BCL2-203ENST00000589955 5011 ntBASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 PTCHD3P3-201ENST00000403073 906 ntBASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 ACTG1P4-201ENST00000425123 1122 ntBASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 C20orf181-201ENST00000623918 480 ntBASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CSNK1G3Q9Y6M4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 MKNK2P1-201ENST00000437526 628 ntBASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 DNAJB3-202ENST00000449667 1266 ntBASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 REXO1L9P-201ENST00000604264 2108 ntBASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 AC092865.6-201ENST00000642101 219 ntBASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CSNK1G3Q9Y6M4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms