Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 AC055876.3-201ENST00000431496 288 ntBASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 AL512356.2-201ENST00000546955 174 ntBASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 AL135744.1-201ENST00000565098 629 ntBASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 AC138649.4-201ENST00000612222 287 ntBASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.04■□□□□ 0.48
HCFC2Q9Y5Z7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 AC009113.1-201ENST00000570267 2443 ntBASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 AL138781.2-201ENST00000617896 1843 ntBASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 RARRES2P8-201ENST00000566335 367 ntBASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 AP001059.3-201ENST00000619053 235 ntBASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 AF228730.6-201ENST00000641497 218 ntBASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 AC084121.3-201ENST00000641716 218 ntBASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 AC105233.6-201ENST00000642093 218 ntBASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HCFC2Q9Y5Z7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 TUBB3P1-201ENST00000405796 1332 ntBASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 BASP1P1-201ENST00000430708 665 ntBASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 GPS2P2-201ENST00000430745 888 ntBASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HCFC2Q9Y5Z7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
HCFC2Q9Y5Z7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HCFC2Q9Y5Z7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.02■□□□□ 0.47
HCFC2Q9Y5Z7 FLJ13224-201ENST00000313737 1514 ntBASIC18.02■□□□□ 0.47
HCFC2Q9Y5Z7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HCFC2Q9Y5Z7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HCFC2Q9Y5Z7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HCFC2Q9Y5Z7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.02■□□□□ 0.47
HCFC2Q9Y5Z7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCFC2Q9Y5Z7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.01■□□□□ 0.47
HCFC2Q9Y5Z7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
HCFC2Q9Y5Z7 AKAP8P1-201ENST00000434743 1349 ntBASIC18.01■□□□□ 0.47
HCFC2Q9Y5Z7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCFC2Q9Y5Z7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HCFC2Q9Y5Z7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
HCFC2Q9Y5Z7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HCFC2Q9Y5Z7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms