Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
AP4E1Q9UPM8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
AP4E1Q9UPM8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.04■□□□□ 0.48
AP4E1Q9UPM8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.04■□□□□ 0.48
AP4E1Q9UPM8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.04■□□□□ 0.48
AP4E1Q9UPM8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP4E1Q9UPM8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP4E1Q9UPM8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.04■□□□□ 0.48
AP4E1Q9UPM8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
AP4E1Q9UPM8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP4E1Q9UPM8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
AP4E1Q9UPM8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 AC093525.9-201ENST00000624961 1746 ntBASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 KRT18P56-201ENST00000507275 550 ntBASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 AC091304.2-201ENST00000564639 760 ntBASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 AP005117.1-201ENST00000584346 1413 ntBASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
AP4E1Q9UPM8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 AC080080.1-201ENST00000625121 2420 ntBASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 AC079776.2-201ENST00000641154 1609 ntBASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 SIGLEC16-201ENST00000599858 1437 ntBASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
AP4E1Q9UPM8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.47
AP4E1Q9UPM8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
AP4E1Q9UPM8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
AP4E1Q9UPM8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
AP4E1Q9UPM8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
AP4E1Q9UPM8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 SIGLEC30P-201ENST00000455569 941 ntBASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 AC106795.1-205ENST00000512851 1056 ntBASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.01■□□□□ 0.47
AP4E1Q9UPM8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms