Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCSER1Q9C0I3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCSER1Q9C0I3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCSER1Q9C0I3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCSER1Q9C0I3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCSER1Q9C0I3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCSER1Q9C0I3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCSER1Q9C0I3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCSER1Q9C0I3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCSER1Q9C0I3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCSER1Q9C0I3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCSER1Q9C0I3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 PCDHA12-202ENST00000613593 2588 ntBASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.41■□□□□ 0.7
CCSER1Q9C0I3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 AC097637.2-201ENST00000624096 1997 ntBASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 AC090340.1-201ENST00000620778 4980 ntBASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCSER1Q9C0I3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms