Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 AL355802.2-201ENST00000402069 882 ntBASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 MIR4674-201ENST00000582457 87 ntBASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSBP4Q9BWG4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 AC116562.2-201ENST00000507042 360 ntBASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 SLC25A1P4-201ENST00000567977 778 ntBASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 RN7SL275P-201ENST00000582762 335 ntBASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 AC006213.4-201ENST00000616184 634 ntBASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 AC073648.6-201ENST00000641589 218 ntBASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 AC023824.1-201ENST00000562945 2975 ntBASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP4Q9BWG4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 AC022898.2-201ENST00000616822 1312 ntBASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP4Q9BWG4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms